Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.89□□□□□ -0.19
CCL1P22362 RPS8P6-201ENST00000426177 609 ntBASIC13.89□□□□□ -0.19
CCL1P22362 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.89□□□□□ -0.19
CCL1P22362 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.89□□□□□ -0.19
CCL1P22362 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.89□□□□□ -0.19
CCL1P22362 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CCL1P22362 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.89□□□□□ -0.19
CCL1P22362 FAM197Y3-203ENST00000618346 717 ntBASIC13.89□□□□□ -0.19
CCL1P22362 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.89□□□□□ -0.19
CCL1P22362 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL1P22362 AC090616.6-203ENST00000579186 1945 ntBASIC13.89□□□□□ -0.19
CCL1P22362 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCL1P22362 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.89□□□□□ -0.19
CCL1P22362 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCL1P22362 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.89□□□□□ -0.19
CCL1P22362 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.89□□□□□ -0.19
CCL1P22362 AC006486.2-201ENST00000624246 2199 ntBASIC13.89□□□□□ -0.19
CCL1P22362 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CCL1P22362 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL1P22362 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL1P22362 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.88□□□□□ -0.19
CCL1P22362 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL1P22362 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCL1P22362 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.88□□□□□ -0.19
CCL1P22362 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL1P22362 BNIP3P1-202ENST00000550043 1585 ntBASIC13.88□□□□□ -0.19
CCL1P22362 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.88□□□□□ -0.19
CCL1P22362 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CCL1P22362 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL1P22362 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.88□□□□□ -0.19
CCL1P22362 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CCL1P22362 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL1P22362 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.88□□□□□ -0.19
CCL1P22362 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.88□□□□□ -0.19
CCL1P22362 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CCL1P22362 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL1P22362 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.88□□□□□ -0.19
CCL1P22362 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CCL1P22362 FAM220BP-201ENST00000377689 816 ntBASIC13.88□□□□□ -0.19
CCL1P22362 AC004987.2-201ENST00000395959 1148 ntBASIC13.88□□□□□ -0.19
CCL1P22362 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CCL1P22362 ADH5P3-201ENST00000433842 1137 ntBASIC13.88□□□□□ -0.19
CCL1P22362 FDX1P1-201ENST00000449115 551 ntBASIC13.88□□□□□ -0.19
CCL1P22362 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.88□□□□□ -0.19
CCL1P22362 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.88□□□□□ -0.19
CCL1P22362 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.88□□□□□ -0.19
CCL1P22362 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.88□□□□□ -0.19
CCL1P22362 AL135744.1-201ENST00000565098 629 ntBASIC13.88□□□□□ -0.19
CCL1P22362 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.88□□□□□ -0.19
CCL1P22362 AC027307.2-201ENST00000591252 911 ntBASIC13.88□□□□□ -0.19
CCL1P22362 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL1P22362 AC027601.4-201ENST00000611259 610 ntBASIC13.88□□□□□ -0.19
CCL1P22362 BX640515.1-201ENST00000617215 977 ntBASIC13.88□□□□□ -0.19
CCL1P22362 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL1P22362 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL1P22362 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL1P22362 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.88□□□□□ -0.19
CCL1P22362 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL1P22362 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
CCL1P22362 AL109954.1-202ENST00000564051 2148 ntBASIC13.88□□□□□ -0.19
CCL1P22362 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL1P22362 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL1P22362 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCL1P22362 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCL1P22362 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCL1P22362 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.88□□□□□ -0.19
CCL1P22362 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL1P22362 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CCL1P22362 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CCL1P22362 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL1P22362 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
CCL1P22362 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL1P22362 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL1P22362 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL1P22362 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CCL1P22362 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CCL1P22362 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL1P22362 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL1P22362 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 AC144831.1-201ENST00000573312 2656 ntBASIC13.87□□□□□ -0.19
CCL1P22362 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 TFAMP1-201ENST00000412727 736 ntBASIC13.87□□□□□ -0.19
CCL1P22362 AL590627.1-203ENST00000421194 1026 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms