Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.48■□□□□ 0.23
COL9A1P20849 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL9A1P20849 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
COL9A1P20849 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL9A1P20849 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.48■□□□□ 0.23
COL9A1P20849 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COL9A1P20849 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.47■□□□□ 0.23
COL9A1P20849 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL9A1P20849 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
COL9A1P20849 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
COL9A1P20849 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL9A1P20849 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.47■□□□□ 0.23
COL9A1P20849 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL9A1P20849 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL9A1P20849 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
COL9A1P20849 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.47■□□□□ 0.23
COL9A1P20849 GPAA1P2-202ENST00000606848 1787 ntBASIC16.47■□□□□ 0.23
COL9A1P20849 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL9A1P20849 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.47■□□□□ 0.23
COL9A1P20849 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
COL9A1P20849 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL9A1P20849 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
COL9A1P20849 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL9A1P20849 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
COL9A1P20849 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
COL9A1P20849 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.47■□□□□ 0.23
COL9A1P20849 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL9A1P20849 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL9A1P20849 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL9A1P20849 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.47■□□□□ 0.23
COL9A1P20849 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL9A1P20849 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL9A1P20849 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC16.47■□□□□ 0.23
COL9A1P20849 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16.47■□□□□ 0.23
COL9A1P20849 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL9A1P20849 AC023310.1-201ENST00000554836 735 ntBASIC16.47■□□□□ 0.23
COL9A1P20849 AC135983.4-201ENST00000564116 1262 ntBASIC16.47■□□□□ 0.23
COL9A1P20849 AC104982.3-201ENST00000581995 514 ntBASIC16.47■□□□□ 0.23
COL9A1P20849 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.47■□□□□ 0.23
COL9A1P20849 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL9A1P20849 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
COL9A1P20849 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL9A1P20849 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL9A1P20849 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.47■□□□□ 0.23
COL9A1P20849 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.47■□□□□ 0.23
COL9A1P20849 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL9A1P20849 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.46■□□□□ 0.23
COL9A1P20849 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL9A1P20849 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL9A1P20849 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL9A1P20849 GGT4P-201ENST00000623672 1708 ntBASIC16.46■□□□□ 0.23
COL9A1P20849 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL9A1P20849 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL9A1P20849 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
COL9A1P20849 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.46■□□□□ 0.23
COL9A1P20849 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.46■□□□□ 0.23
COL9A1P20849 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.46■□□□□ 0.23
COL9A1P20849 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.46■□□□□ 0.23
COL9A1P20849 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.46■□□□□ 0.23
COL9A1P20849 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL9A1P20849 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
COL9A1P20849 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.46■□□□□ 0.23
COL9A1P20849 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.46■□□□□ 0.23
COL9A1P20849 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.46■□□□□ 0.23
COL9A1P20849 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC16.46■□□□□ 0.23
COL9A1P20849 AL049840.4-201ENST00000602422 811 ntBASIC16.46■□□□□ 0.23
COL9A1P20849 AC244669.2-201ENST00000612320 853 ntBASIC16.46■□□□□ 0.23
COL9A1P20849 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.46■□□□□ 0.23
COL9A1P20849 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL9A1P20849 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL9A1P20849 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL9A1P20849 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL9A1P20849 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL9A1P20849 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
COL9A1P20849 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.46■□□□□ 0.23
COL9A1P20849 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.46■□□□□ 0.23
COL9A1P20849 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL9A1P20849 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
COL9A1P20849 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
COL9A1P20849 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.46■□□□□ 0.22
COL9A1P20849 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
COL9A1P20849 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL9A1P20849 AHCYP2-201ENST00000430630 1300 ntBASIC16.45■□□□□ 0.22
COL9A1P20849 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.45■□□□□ 0.22
COL9A1P20849 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
COL9A1P20849 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL9A1P20849 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
COL9A1P20849 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL9A1P20849 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL9A1P20849 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL9A1P20849 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.45■□□□□ 0.22
COL9A1P20849 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.45■□□□□ 0.22
COL9A1P20849 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL9A1P20849 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
COL9A1P20849 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.45■□□□□ 0.22
COL9A1P20849 AC007688.1-201ENST00000475592 759 ntBASIC16.45■□□□□ 0.22
COL9A1P20849 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.45■□□□□ 0.22
COL9A1P20849 AP002490.2-201ENST00000524791 560 ntBASIC16.45■□□□□ 0.22
COL9A1P20849 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC16.45■□□□□ 0.22
COL9A1P20849 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms