Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD53P19397 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD53P19397 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD53P19397 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.75□□□□□ -0.05
CD53P19397 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CD53P19397 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD53P19397 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.75□□□□□ -0.05
CD53P19397 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD53P19397 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD53P19397 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CD53P19397 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD53P19397 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD53P19397 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD53P19397 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.75□□□□□ -0.05
CD53P19397 CXCL1P1-201ENST00000502804 216 ntBASIC14.75□□□□□ -0.05
CD53P19397 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD53P19397 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD53P19397 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD53P19397 AC068137.2-201ENST00000605408 478 ntBASIC14.75□□□□□ -0.05
CD53P19397 REXO1L3P-201ENST00000622202 1288 ntBASIC14.75□□□□□ -0.05
CD53P19397 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD53P19397 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD53P19397 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD53P19397 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CD53P19397 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD53P19397 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CD53P19397 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD53P19397 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.75□□□□□ -0.05
CD53P19397 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD53P19397 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.75□□□□□ -0.05
CD53P19397 SNX33P1-201ENST00000592116 1762 ntBASIC14.75□□□□□ -0.05
CD53P19397 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD53P19397 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD53P19397 LINC01144-201ENST00000626198 1710 ntBASIC14.75□□□□□ -0.05
CD53P19397 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD53P19397 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD53P19397 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD53P19397 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD53P19397 TOP3BP1-201ENST00000420768 1380 ntBASIC14.74□□□□□ -0.05
CD53P19397 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD53P19397 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD53P19397 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD53P19397 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.74□□□□□ -0.05
CD53P19397 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD53P19397 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CD53P19397 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD53P19397 AC112504.1-201ENST00000623415 1841 ntBASIC14.74□□□□□ -0.05
CD53P19397 KC6-207ENST00000600644 2311 ntTSL 3 BASIC14.74□□□□□ -0.05
CD53P19397 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD53P19397 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD53P19397 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD53P19397 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD53P19397 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD53P19397 AC092474.2-201ENST00000424288 719 ntBASIC14.74□□□□□ -0.05
CD53P19397 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.74□□□□□ -0.05
CD53P19397 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.74□□□□□ -0.05
CD53P19397 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD53P19397 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.74□□□□□ -0.05
CD53P19397 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.74□□□□□ -0.05
CD53P19397 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.74□□□□□ -0.05
CD53P19397 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CD53P19397 AC022145.2-201ENST00000598203 171 ntBASIC14.74□□□□□ -0.05
CD53P19397 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.74□□□□□ -0.05
CD53P19397 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.74□□□□□ -0.05
CD53P19397 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CD53P19397 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CD53P19397 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CD53P19397 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.74□□□□□ -0.05
CD53P19397 PI4KAP1-204ENST00000612579 1703 ntBASIC14.74□□□□□ -0.05
CD53P19397 AL512652.2-201ENST00000625156 1716 ntBASIC14.74□□□□□ -0.05
CD53P19397 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CD53P19397 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
CD53P19397 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CD53P19397 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.74□□□□□ -0.05
CD53P19397 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
CD53P19397 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD53P19397 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD53P19397 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD53P19397 KRT8P39-201ENST00000396270 1433 ntBASIC14.74□□□□□ -0.05
CD53P19397 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD53P19397 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD53P19397 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.74□□□□□ -0.05
CD53P19397 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD53P19397 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD53P19397 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CD53P19397 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CD53P19397 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CD53P19397 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD53P19397 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.73□□□□□ -0.05
CD53P19397 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD53P19397 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD53P19397 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD53P19397 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD53P19397 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD53P19397 CDC14C-201ENST00000428251 1719 ntBASIC14.73□□□□□ -0.05
CD53P19397 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CD53P19397 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CD53P19397 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD53P19397 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD53P19397 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms