Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC2P18074 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.62■□□□□ 0.25
ERCC2P18074 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC2P18074 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC2P18074 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC2P18074 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC2P18074 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ERCC2P18074 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.62■□□□□ 0.25
ERCC2P18074 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.62■□□□□ 0.25
ERCC2P18074 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC2P18074 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.62■□□□□ 0.25
ERCC2P18074 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.62■□□□□ 0.25
ERCC2P18074 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.62■□□□□ 0.25
ERCC2P18074 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ERCC2P18074 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.62■□□□□ 0.25
ERCC2P18074 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.62■□□□□ 0.25
ERCC2P18074 AC018529.1-201ENST00000613063 361 ntBASIC16.62■□□□□ 0.25
ERCC2P18074 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC2P18074 AC139530.3-201ENST00000620344 690 ntBASIC16.62■□□□□ 0.25
ERCC2P18074 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.62■□□□□ 0.25
ERCC2P18074 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC2P18074 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC2P18074 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC2P18074 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC2P18074 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC2P18074 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC2P18074 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC2P18074 AL136982.4-201ENST00000437689 1740 ntBASIC16.62■□□□□ 0.25
ERCC2P18074 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
ERCC2P18074 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC2P18074 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC2P18074 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC2P18074 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC2P18074 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.61■□□□□ 0.25
ERCC2P18074 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC2P18074 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC2P18074 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC2P18074 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.61■□□□□ 0.25
ERCC2P18074 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC2P18074 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC2P18074 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC2P18074 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC2P18074 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.61■□□□□ 0.25
ERCC2P18074 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC2P18074 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.61■□□□□ 0.25
ERCC2P18074 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC2P18074 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC2P18074 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC2P18074 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.61■□□□□ 0.25
ERCC2P18074 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC2P18074 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC2P18074 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ERCC2P18074 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC2P18074 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC2P18074 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC2P18074 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.61■□□□□ 0.25
ERCC2P18074 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC2P18074 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
ERCC2P18074 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC2P18074 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.6■□□□□ 0.25
ERCC2P18074 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.6■□□□□ 0.25
ERCC2P18074 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.6■□□□□ 0.25
ERCC2P18074 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.6■□□□□ 0.25
ERCC2P18074 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC2P18074 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.6■□□□□ 0.25
ERCC2P18074 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.6■□□□□ 0.25
ERCC2P18074 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.6■□□□□ 0.25
ERCC2P18074 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC2P18074 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
ERCC2P18074 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
ERCC2P18074 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC2P18074 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.6■□□□□ 0.25
ERCC2P18074 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.6■□□□□ 0.25
ERCC2P18074 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.6■□□□□ 0.25
ERCC2P18074 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.6■□□□□ 0.25
ERCC2P18074 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.6■□□□□ 0.25
ERCC2P18074 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.6■□□□□ 0.25
ERCC2P18074 AC243562.2-201ENST00000561247 970 ntBASIC16.6■□□□□ 0.25
ERCC2P18074 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
ERCC2P18074 AP001160.2-201ENST00000596071 487 ntBASIC16.6■□□□□ 0.25
ERCC2P18074 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.6■□□□□ 0.25
ERCC2P18074 AP001059.3-201ENST00000619053 235 ntBASIC16.6■□□□□ 0.25
ERCC2P18074 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC2P18074 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC2P18074 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC2P18074 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.6■□□□□ 0.25
ERCC2P18074 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.6■□□□□ 0.25
ERCC2P18074 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.6■□□□□ 0.25
ERCC2P18074 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.6■□□□□ 0.25
ERCC2P18074 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC2P18074 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC2P18074 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC2P18074 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.6■□□□□ 0.25
ERCC2P18074 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.59■□□□□ 0.25
ERCC2P18074 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC2P18074 PAUPAR-201ENST00000630360 2965 ntBASIC16.59■□□□□ 0.25
ERCC2P18074 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.59■□□□□ 0.25
ERCC2P18074 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ERCC2P18074 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ERCC2P18074 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms