Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A2P16615 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A2P16615 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A2P16615 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ATP2A2P16615 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A2P16615 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A2P16615 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.86■□□□□ 0.45
ATP2A2P16615 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.86■□□□□ 0.45
ATP2A2P16615 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.86■□□□□ 0.45
ATP2A2P16615 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.86■□□□□ 0.45
ATP2A2P16615 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ATP2A2P16615 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.86■□□□□ 0.45
ATP2A2P16615 AL512361.1-201ENST00000554200 418 ntBASIC17.86■□□□□ 0.45
ATP2A2P16615 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.86■□□□□ 0.45
ATP2A2P16615 AC044860.1-202ENST00000559481 777 ntBASIC17.86■□□□□ 0.45
ATP2A2P16615 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.86■□□□□ 0.45
ATP2A2P16615 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A2P16615 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.86■□□□□ 0.45
ATP2A2P16615 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.86■□□□□ 0.45
ATP2A2P16615 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.86■□□□□ 0.45
ATP2A2P16615 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A2P16615 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.86■□□□□ 0.45
ATP2A2P16615 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A2P16615 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A2P16615 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A2P16615 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A2P16615 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.86■□□□□ 0.45
ATP2A2P16615 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A2P16615 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A2P16615 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A2P16615 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A2P16615 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A2P16615 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A2P16615 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A2P16615 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A2P16615 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ATP2A2P16615 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.86■□□□□ 0.45
ATP2A2P16615 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
ATP2A2P16615 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A2P16615 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A2P16615 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A2P16615 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A2P16615 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
ATP2A2P16615 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A2P16615 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A2P16615 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A2P16615 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.85■□□□□ 0.45
ATP2A2P16615 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.85■□□□□ 0.45
ATP2A2P16615 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A2P16615 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
ATP2A2P16615 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.85■□□□□ 0.45
ATP2A2P16615 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.85■□□□□ 0.45
ATP2A2P16615 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
ATP2A2P16615 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.85■□□□□ 0.45
ATP2A2P16615 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ATP2A2P16615 SPDYE18-201ENST00000510091 1050 ntBASIC17.85■□□□□ 0.45
ATP2A2P16615 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A2P16615 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.85■□□□□ 0.45
ATP2A2P16615 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A2P16615 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.85■□□□□ 0.45
ATP2A2P16615 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A2P16615 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.85■□□□□ 0.45
ATP2A2P16615 AC084346.2-201ENST00000607097 949 ntBASIC17.85■□□□□ 0.45
ATP2A2P16615 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A2P16615 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.85■□□□□ 0.45
ATP2A2P16615 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.85■□□□□ 0.45
ATP2A2P16615 AL033527.4-201ENST00000641026 673 ntBASIC17.85■□□□□ 0.45
ATP2A2P16615 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A2P16615 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A2P16615 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.85■□□□□ 0.45
ATP2A2P16615 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A2P16615 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A2P16615 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A2P16615 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A2P16615 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A2P16615 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP2A2P16615 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.84■□□□□ 0.45
ATP2A2P16615 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A2P16615 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A2P16615 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP2A2P16615 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
ATP2A2P16615 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.84■□□□□ 0.45
ATP2A2P16615 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
ATP2A2P16615 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A2P16615 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP2A2P16615 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A2P16615 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A2P16615 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A2P16615 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
ATP2A2P16615 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A2P16615 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
ATP2A2P16615 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
ATP2A2P16615 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.84■□□□□ 0.45
ATP2A2P16615 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ATP2A2P16615 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A2P16615 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A2P16615 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.84■□□□□ 0.45
ATP2A2P16615 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP2A2P16615 MIR4259-201ENST00000584466 101 ntBASIC17.84■□□□□ 0.45
ATP2A2P16615 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms