Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SCG2P13521 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.54■□□□□ 0.56
SCG2P13521 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCG2P13521 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCG2P13521 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
SCG2P13521 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCG2P13521 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SCG2P13521 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCG2P13521 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.54■□□□□ 0.56
SCG2P13521 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCG2P13521 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SCG2P13521 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCG2P13521 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCG2P13521 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCG2P13521 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SCG2P13521 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SCG2P13521 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCG2P13521 AC107890.1-201ENST00000422478 521 ntBASIC18.54■□□□□ 0.56
SCG2P13521 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCG2P13521 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.54■□□□□ 0.56
SCG2P13521 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.54■□□□□ 0.56
SCG2P13521 SPCS2P1-201ENST00000561636 679 ntBASIC18.54■□□□□ 0.56
SCG2P13521 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.54■□□□□ 0.56
SCG2P13521 AC140878.1-201ENST00000565277 250 ntBASIC18.54■□□□□ 0.56
SCG2P13521 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.54■□□□□ 0.56
SCG2P13521 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
SCG2P13521 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCG2P13521 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SCG2P13521 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCG2P13521 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SCG2P13521 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCG2P13521 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCG2P13521 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCG2P13521 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SCG2P13521 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCG2P13521 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCG2P13521 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCG2P13521 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCG2P13521 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCG2P13521 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.53■□□□□ 0.56
SCG2P13521 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.53■□□□□ 0.56
SCG2P13521 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.53■□□□□ 0.56
SCG2P13521 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.53■□□□□ 0.56
SCG2P13521 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCG2P13521 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCG2P13521 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCG2P13521 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.53■□□□□ 0.56
SCG2P13521 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.53■□□□□ 0.56
SCG2P13521 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCG2P13521 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCG2P13521 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCG2P13521 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SCG2P13521 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCG2P13521 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCG2P13521 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.53■□□□□ 0.56
SCG2P13521 SPDYE17-201ENST00000412399 783 ntBASIC18.53■□□□□ 0.56
SCG2P13521 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCG2P13521 EEF1DP4-201ENST00000446006 880 ntBASIC18.53■□□□□ 0.56
SCG2P13521 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SCG2P13521 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.53■□□□□ 0.56
SCG2P13521 AL079307.3-201ENST00000556114 283 ntBASIC18.53■□□□□ 0.56
SCG2P13521 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.53■□□□□ 0.56
SCG2P13521 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.53■□□□□ 0.56
SCG2P13521 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.53■□□□□ 0.56
SCG2P13521 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SCG2P13521 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.53■□□□□ 0.56
SCG2P13521 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCG2P13521 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.53■□□□□ 0.56
SCG2P13521 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.53■□□□□ 0.56
SCG2P13521 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.53■□□□□ 0.56
SCG2P13521 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCG2P13521 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.53■□□□□ 0.56
SCG2P13521 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCG2P13521 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCG2P13521 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCG2P13521 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCG2P13521 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCG2P13521 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCG2P13521 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SCG2P13521 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCG2P13521 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SCG2P13521 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SCG2P13521 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.52■□□□□ 0.56
SCG2P13521 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
SCG2P13521 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.52■□□□□ 0.56
SCG2P13521 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SCG2P13521 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.52■□□□□ 0.56
SCG2P13521 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.52■□□□□ 0.56
SCG2P13521 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SCG2P13521 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCG2P13521 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCG2P13521 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
SCG2P13521 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SCG2P13521 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCG2P13521 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SCG2P13521 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.52■□□□□ 0.56
SCG2P13521 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
SCG2P13521 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCG2P13521 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCG2P13521 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms