Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DEFA4P12838 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DEFA4P12838 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
DEFA4P12838 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA4P12838 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
DEFA4P12838 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
DEFA4P12838 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA4P12838 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA4P12838 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA4P12838 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
DEFA4P12838 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.22□□□□□ -0.29
DEFA4P12838 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.22□□□□□ -0.29
DEFA4P12838 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA4P12838 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA4P12838 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
DEFA4P12838 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.22□□□□□ -0.29
DEFA4P12838 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA4P12838 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA4P12838 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA4P12838 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.22□□□□□ -0.29
DEFA4P12838 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA4P12838 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.22□□□□□ -0.29
DEFA4P12838 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA4P12838 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.22□□□□□ -0.29
DEFA4P12838 FAAHP1-202ENST00000446499 1238 ntBASIC13.22□□□□□ -0.29
DEFA4P12838 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA4P12838 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.22□□□□□ -0.29
DEFA4P12838 AC093909.1-201ENST00000504731 1122 ntBASIC13.22□□□□□ -0.29
DEFA4P12838 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
DEFA4P12838 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.22□□□□□ -0.29
DEFA4P12838 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.22□□□□□ -0.29
DEFA4P12838 AC005412.3-201ENST00000580309 715 ntBASIC13.22□□□□□ -0.29
DEFA4P12838 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.22□□□□□ -0.29
DEFA4P12838 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
DEFA4P12838 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
DEFA4P12838 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.22□□□□□ -0.29
DEFA4P12838 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.22□□□□□ -0.29
DEFA4P12838 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA4P12838 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.22□□□□□ -0.29
DEFA4P12838 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA4P12838 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA4P12838 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.22□□□□□ -0.29
DEFA4P12838 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.22□□□□□ -0.29
DEFA4P12838 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA4P12838 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA4P12838 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA4P12838 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA4P12838 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA4P12838 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DEFA4P12838 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA4P12838 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA4P12838 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.21□□□□□ -0.29
DEFA4P12838 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA4P12838 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.21□□□□□ -0.29
DEFA4P12838 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.21□□□□□ -0.29
DEFA4P12838 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
DEFA4P12838 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA4P12838 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA4P12838 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA4P12838 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA4P12838 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.21□□□□□ -0.29
DEFA4P12838 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA4P12838 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.21□□□□□ -0.29
DEFA4P12838 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
DEFA4P12838 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA4P12838 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
DEFA4P12838 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
DEFA4P12838 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA4P12838 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA4P12838 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
DEFA4P12838 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
DEFA4P12838 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.21□□□□□ -0.29
DEFA4P12838 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.21□□□□□ -0.29
DEFA4P12838 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.21□□□□□ -0.29
DEFA4P12838 MRPL20P1-201ENST00000400819 433 ntBASIC13.21□□□□□ -0.29
DEFA4P12838 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
DEFA4P12838 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
DEFA4P12838 AL450487.1-201ENST00000426799 995 ntBASIC13.21□□□□□ -0.29
DEFA4P12838 KRT18P27-201ENST00000427733 1299 ntBASIC13.21□□□□□ -0.29
DEFA4P12838 DUSP5P1-201ENST00000441325 1139 ntBASIC13.21□□□□□ -0.29
DEFA4P12838 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
DEFA4P12838 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA4P12838 SLC25A6P2-201ENST00000497974 877 ntBASIC13.21□□□□□ -0.29
DEFA4P12838 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.21□□□□□ -0.29
DEFA4P12838 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.21□□□□□ -0.29
DEFA4P12838 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.21□□□□□ -0.29
DEFA4P12838 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.21□□□□□ -0.29
DEFA4P12838 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.21□□□□□ -0.29
DEFA4P12838 AC087641.1-201ENST00000557561 1021 ntBASIC13.21□□□□□ -0.29
DEFA4P12838 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.21□□□□□ -0.29
DEFA4P12838 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.21□□□□□ -0.29
DEFA4P12838 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.21□□□□□ -0.29
DEFA4P12838 RN7SL510P-201ENST00000581311 263 ntBASIC13.21□□□□□ -0.29
DEFA4P12838 AC008667.4-201ENST00000607370 168 ntBASIC13.21□□□□□ -0.29
DEFA4P12838 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.21□□□□□ -0.29
DEFA4P12838 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.21□□□□□ -0.29
DEFA4P12838 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA4P12838 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA4P12838 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA4P12838 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms