Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
COL11A1P12107 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.02■□□□□ 0.48
COL11A1P12107 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.02■□□□□ 0.48
COL11A1P12107 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.02■□□□□ 0.48
COL11A1P12107 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.02■□□□□ 0.48
COL11A1P12107 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL11A1P12107 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.02■□□□□ 0.48
COL11A1P12107 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.02■□□□□ 0.48
COL11A1P12107 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL11A1P12107 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL11A1P12107 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.02■□□□□ 0.48
COL11A1P12107 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL11A1P12107 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL11A1P12107 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL11A1P12107 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL11A1P12107 AL662844.4-201ENST00000606367 2838 ntBASIC18.02■□□□□ 0.48
COL11A1P12107 AC124067.4-201ENST00000519691 2379 ntBASIC18.02■□□□□ 0.48
COL11A1P12107 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
COL11A1P12107 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL11A1P12107 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL11A1P12107 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL11A1P12107 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
COL11A1P12107 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.02■□□□□ 0.48
COL11A1P12107 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL11A1P12107 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
COL11A1P12107 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL11A1P12107 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.02■□□□□ 0.47
COL11A1P12107 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.02■□□□□ 0.47
COL11A1P12107 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
COL11A1P12107 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.02■□□□□ 0.47
COL11A1P12107 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL11A1P12107 KLF2P4-201ENST00000451959 1225 ntBASIC18.02■□□□□ 0.47
COL11A1P12107 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
COL11A1P12107 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.02■□□□□ 0.47
COL11A1P12107 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.02■□□□□ 0.47
COL11A1P12107 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
COL11A1P12107 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
COL11A1P12107 AC099548.2-209ENST00000480264 625 ntBASIC18.02■□□□□ 0.47
COL11A1P12107 AC108725.1-201ENST00000495472 409 ntBASIC18.02■□□□□ 0.47
COL11A1P12107 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC18.02■□□□□ 0.47
COL11A1P12107 DUX4L45-201ENST00000566406 1057 ntBASIC18.02■□□□□ 0.47
COL11A1P12107 CLUHP6-201ENST00000580789 941 ntBASIC18.02■□□□□ 0.47
COL11A1P12107 RHOXF1P1-202ENST00000635473 501 ntBASIC18.02■□□□□ 0.47
COL11A1P12107 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
COL11A1P12107 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
COL11A1P12107 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
COL11A1P12107 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
COL11A1P12107 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL11A1P12107 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL11A1P12107 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL11A1P12107 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL11A1P12107 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.01■□□□□ 0.47
COL11A1P12107 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL11A1P12107 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.01■□□□□ 0.47
COL11A1P12107 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
COL11A1P12107 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.01■□□□□ 0.47
COL11A1P12107 TPO-206ENST00000382269 1155 ntTSL 5 BASIC18.01■□□□□ 0.47
COL11A1P12107 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.01■□□□□ 0.47
COL11A1P12107 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.01■□□□□ 0.47
COL11A1P12107 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL11A1P12107 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.01■□□□□ 0.47
COL11A1P12107 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL11A1P12107 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.01■□□□□ 0.47
COL11A1P12107 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.01■□□□□ 0.47
COL11A1P12107 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL11A1P12107 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
COL11A1P12107 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL11A1P12107 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL11A1P12107 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.01■□□□□ 0.47
COL11A1P12107 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.01■□□□□ 0.47
COL11A1P12107 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL11A1P12107 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL11A1P12107 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL11A1P12107 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL11A1P12107 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.01■□□□□ 0.47
COL11A1P12107 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL11A1P12107 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
COL11A1P12107 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL11A1P12107 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
COL11A1P12107 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
COL11A1P12107 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
COL11A1P12107 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18■□□□□ 0.47
COL11A1P12107 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
COL11A1P12107 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
COL11A1P12107 AC026410.3-201ENST00000514280 936 ntBASIC18■□□□□ 0.47
COL11A1P12107 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC18■□□□□ 0.47
COL11A1P12107 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
COL11A1P12107 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18■□□□□ 0.47
COL11A1P12107 AC093525.8-201ENST00000624099 1342 ntBASIC18■□□□□ 0.47
COL11A1P12107 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
COL11A1P12107 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL11A1P12107 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18■□□□□ 0.47
COL11A1P12107 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18■□□□□ 0.47
COL11A1P12107 AD000864.1-201ENST00000624076 2295 ntBASIC18■□□□□ 0.47
COL11A1P12107 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18■□□□□ 0.47
COL11A1P12107 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL11A1P12107 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL11A1P12107 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL11A1P12107 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL11A1P12107 MIR1908-201ENST00000410394 80 ntBASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms