Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.98■□□□□ 0.63
TOP1P11387 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.98■□□□□ 0.63
TOP1P11387 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.97■□□□□ 0.63
TOP1P11387 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
TOP1P11387 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TOP1P11387 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
TOP1P11387 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TOP1P11387 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TOP1P11387 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TOP1P11387 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TOP1P11387 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TOP1P11387 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
TOP1P11387 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TOP1P11387 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TOP1P11387 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TOP1P11387 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.97■□□□□ 0.63
TOP1P11387 AC241585.1-201ENST00000433527 519 ntBASIC18.97■□□□□ 0.63
TOP1P11387 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.97■□□□□ 0.63
TOP1P11387 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
TOP1P11387 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.97■□□□□ 0.63
TOP1P11387 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.97■□□□□ 0.63
TOP1P11387 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.97■□□□□ 0.63
TOP1P11387 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.97■□□□□ 0.63
TOP1P11387 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.97■□□□□ 0.63
TOP1P11387 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TOP1P11387 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.97■□□□□ 0.63
TOP1P11387 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TOP1P11387 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.97■□□□□ 0.63
TOP1P11387 AL590560.3-201ENST00000623350 461 ntBASIC18.97■□□□□ 0.63
TOP1P11387 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
TOP1P11387 AC100757.3-201ENST00000622361 1406 ntBASIC18.97■□□□□ 0.63
TOP1P11387 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
TOP1P11387 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
TOP1P11387 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
TOP1P11387 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TOP1P11387 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TOP1P11387 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.97■□□□□ 0.63
TOP1P11387 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.97■□□□□ 0.63
TOP1P11387 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.97■□□□□ 0.63
TOP1P11387 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TOP1P11387 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TOP1P11387 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TOP1P11387 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TOP1P11387 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TOP1P11387 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.96■□□□□ 0.63
TOP1P11387 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.96■□□□□ 0.63
TOP1P11387 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TOP1P11387 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TOP1P11387 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TOP1P11387 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.96■□□□□ 0.63
TOP1P11387 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.96■□□□□ 0.63
TOP1P11387 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.96■□□□□ 0.63
TOP1P11387 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TOP1P11387 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TOP1P11387 RPL37AP1-201ENST00000412502 279 ntBASIC18.96■□□□□ 0.63
TOP1P11387 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.96■□□□□ 0.63
TOP1P11387 AL079307.3-201ENST00000556114 283 ntBASIC18.96■□□□□ 0.63
TOP1P11387 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TOP1P11387 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.96■□□□□ 0.63
TOP1P11387 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
TOP1P11387 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.96■□□□□ 0.63
TOP1P11387 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
TOP1P11387 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TOP1P11387 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TOP1P11387 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TOP1P11387 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TOP1P11387 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TOP1P11387 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.96■□□□□ 0.63
TOP1P11387 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TOP1P11387 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TOP1P11387 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TOP1P11387 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TOP1P11387 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.96■□□□□ 0.63
TOP1P11387 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TOP1P11387 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TOP1P11387 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TOP1P11387 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TOP1P11387 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TOP1P11387 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.96■□□□□ 0.63
TOP1P11387 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.96■□□□□ 0.63
TOP1P11387 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TOP1P11387 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.95■□□□□ 0.62
TOP1P11387 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TOP1P11387 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.95■□□□□ 0.62
TOP1P11387 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TOP1P11387 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TOP1P11387 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.95■□□□□ 0.62
TOP1P11387 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
TOP1P11387 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.95■□□□□ 0.62
TOP1P11387 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TOP1P11387 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.95■□□□□ 0.62
TOP1P11387 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TOP1P11387 AL139010.1-201ENST00000454878 894 ntBASIC18.95■□□□□ 0.62
TOP1P11387 INGX-202ENST00000489074 768 ntBASIC18.95■□□□□ 0.62
TOP1P11387 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TOP1P11387 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.95■□□□□ 0.62
TOP1P11387 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TOP1P11387 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.95■□□□□ 0.62
TOP1P11387 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.95■□□□□ 0.62
TOP1P11387 AJ011932.1-201ENST00000621707 465 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms