Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SPTA1P02549 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPTA1P02549 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPTA1P02549 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPTA1P02549 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.57□□□□□ -0.08
SPTA1P02549 AC012441.1-201ENST00000446669 685 ntBASIC14.57□□□□□ -0.08
SPTA1P02549 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.57□□□□□ -0.08
SPTA1P02549 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.57□□□□□ -0.08
SPTA1P02549 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.57□□□□□ -0.08
SPTA1P02549 AC120045.2-201ENST00000567334 178 ntBASIC14.57□□□□□ -0.08
SPTA1P02549 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SPTA1P02549 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.57□□□□□ -0.08
SPTA1P02549 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.57□□□□□ -0.08
SPTA1P02549 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.57□□□□□ -0.08
SPTA1P02549 AC128714.1-201ENST00000637035 887 ntBASIC14.57□□□□□ -0.08
SPTA1P02549 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.57□□□□□ -0.08
SPTA1P02549 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.57□□□□□ -0.08
SPTA1P02549 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPTA1P02549 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPTA1P02549 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SPTA1P02549 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SPTA1P02549 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SPTA1P02549 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPTA1P02549 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SPTA1P02549 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPTA1P02549 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SPTA1P02549 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPTA1P02549 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPTA1P02549 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SPTA1P02549 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.57□□□□□ -0.08
SPTA1P02549 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SPTA1P02549 ACTG1P3-201ENST00000431775 1114 ntBASIC14.57□□□□□ -0.08
SPTA1P02549 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.57□□□□□ -0.08
SPTA1P02549 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.57□□□□□ -0.08
SPTA1P02549 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.57□□□□□ -0.08
SPTA1P02549 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.57□□□□□ -0.08
SPTA1P02549 RHOXF1P1-202ENST00000635473 501 ntBASIC14.57□□□□□ -0.08
SPTA1P02549 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SPTA1P02549 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
SPTA1P02549 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPTA1P02549 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.57□□□□□ -0.08
SPTA1P02549 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.57□□□□□ -0.08
SPTA1P02549 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SPTA1P02549 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPTA1P02549 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPTA1P02549 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.57□□□□□ -0.08
SPTA1P02549 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPTA1P02549 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPTA1P02549 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.57□□□□□ -0.08
SPTA1P02549 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPTA1P02549 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPTA1P02549 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPTA1P02549 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.57□□□□□ -0.08
SPTA1P02549 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SPTA1P02549 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPTA1P02549 PCDHB17P-201ENST00000539533 2393 ntBASIC14.56□□□□□ -0.08
SPTA1P02549 MIR326-201ENST00000362220 95 ntBASIC14.56□□□□□ -0.08
SPTA1P02549 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.56□□□□□ -0.08
SPTA1P02549 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
SPTA1P02549 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.56□□□□□ -0.08
SPTA1P02549 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.56□□□□□ -0.08
SPTA1P02549 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
SPTA1P02549 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.56□□□□□ -0.08
SPTA1P02549 AC244669.2-201ENST00000612320 853 ntBASIC14.56□□□□□ -0.08
SPTA1P02549 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SPTA1P02549 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
SPTA1P02549 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SPTA1P02549 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPTA1P02549 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPTA1P02549 AL161772.1-201ENST00000610494 4412 ntBASIC14.56□□□□□ -0.08
SPTA1P02549 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SPTA1P02549 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.56□□□□□ -0.08
SPTA1P02549 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.56□□□□□ -0.08
SPTA1P02549 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SPTA1P02549 BICD1-207ENST00000551848 1962 ntBASIC14.56□□□□□ -0.08
SPTA1P02549 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPTA1P02549 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.56□□□□□ -0.08
SPTA1P02549 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPTA1P02549 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPTA1P02549 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPTA1P02549 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC14.56□□□□□ -0.08
SPTA1P02549 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPTA1P02549 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.56□□□□□ -0.08
SPTA1P02549 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPTA1P02549 AC022137.2-201ENST00000503482 481 ntBASIC14.56□□□□□ -0.08
SPTA1P02549 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SPTA1P02549 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SPTA1P02549 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SPTA1P02549 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
SPTA1P02549 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPTA1P02549 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SPTA1P02549 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPTA1P02549 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SPTA1P02549 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.56□□□□□ -0.08
SPTA1P02549 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SPTA1P02549 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
SPTA1P02549 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.56□□□□□ -0.08
SPTA1P02549 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.55□□□□□ -0.08
SPTA1P02549 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPTA1P02549 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms