Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KDM4BO94953 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
KDM4BO94953 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KDM4BO94953 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KDM4BO94953 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
KDM4BO94953 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KDM4BO94953 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.3□□□□□ -0.12
KDM4BO94953 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
KDM4BO94953 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KDM4BO94953 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KDM4BO94953 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
KDM4BO94953 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
KDM4BO94953 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KDM4BO94953 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KDM4BO94953 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KDM4BO94953 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.3□□□□□ -0.12
KDM4BO94953 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KDM4BO94953 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KDM4BO94953 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KDM4BO94953 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.29□□□□□ -0.12
KDM4BO94953 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KDM4BO94953 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
KDM4BO94953 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
KDM4BO94953 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
KDM4BO94953 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KDM4BO94953 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.29□□□□□ -0.12
KDM4BO94953 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KDM4BO94953 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KDM4BO94953 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
KDM4BO94953 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.29□□□□□ -0.12
KDM4BO94953 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
KDM4BO94953 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KDM4BO94953 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
KDM4BO94953 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KDM4BO94953 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.29□□□□□ -0.12
KDM4BO94953 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KDM4BO94953 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KDM4BO94953 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KDM4BO94953 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.29□□□□□ -0.12
KDM4BO94953 PTCHD3P3-201ENST00000403073 906 ntBASIC14.29□□□□□ -0.12
KDM4BO94953 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
KDM4BO94953 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.29□□□□□ -0.12
KDM4BO94953 AC087163.2-201ENST00000457299 853 ntBASIC14.29□□□□□ -0.12
KDM4BO94953 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.29□□□□□ -0.12
KDM4BO94953 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.29□□□□□ -0.12
KDM4BO94953 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.29□□□□□ -0.12
KDM4BO94953 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.29□□□□□ -0.12
KDM4BO94953 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KDM4BO94953 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.29□□□□□ -0.12
KDM4BO94953 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KDM4BO94953 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.29□□□□□ -0.12
KDM4BO94953 AC025062.2-201ENST00000605477 670 ntBASIC14.29□□□□□ -0.12
KDM4BO94953 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
KDM4BO94953 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.29□□□□□ -0.12
KDM4BO94953 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
KDM4BO94953 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KDM4BO94953 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.29□□□□□ -0.12
KDM4BO94953 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
KDM4BO94953 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KDM4BO94953 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
KDM4BO94953 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KDM4BO94953 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KDM4BO94953 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
KDM4BO94953 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
KDM4BO94953 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KDM4BO94953 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
KDM4BO94953 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KDM4BO94953 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
KDM4BO94953 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.29□□□□□ -0.12
KDM4BO94953 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KDM4BO94953 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KDM4BO94953 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KDM4BO94953 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
KDM4BO94953 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KDM4BO94953 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
KDM4BO94953 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KDM4BO94953 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
KDM4BO94953 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KDM4BO94953 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KDM4BO94953 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
KDM4BO94953 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.28□□□□□ -0.12
KDM4BO94953 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
KDM4BO94953 LAGE3P1-201ENST00000425356 484 ntBASIC14.28□□□□□ -0.12
KDM4BO94953 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.28□□□□□ -0.12
KDM4BO94953 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
KDM4BO94953 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
KDM4BO94953 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KDM4BO94953 MPDU1-223ENST00000582151 728 ntBASIC14.28□□□□□ -0.12
KDM4BO94953 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.28□□□□□ -0.12
KDM4BO94953 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.28□□□□□ -0.12
KDM4BO94953 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
KDM4BO94953 AC006557.2-201ENST00000592985 1240 ntBASIC14.28□□□□□ -0.12
KDM4BO94953 REXO1L3P-201ENST00000622202 1288 ntBASIC14.28□□□□□ -0.12
KDM4BO94953 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
KDM4BO94953 AL805961.1-202ENST00000641562 540 ntBASIC14.28□□□□□ -0.12
KDM4BO94953 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
KDM4BO94953 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KDM4BO94953 ST20-AS1-201ENST00000560255 4223 ntBASIC14.28□□□□□ -0.12
KDM4BO94953 SNX18-202ENST00000343017 3140 ntBASIC14.28□□□□□ -0.12
KDM4BO94953 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms