Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1BO75841 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1BO75841 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1BO75841 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
UPK1BO75841 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1BO75841 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.11□□□□□ -0.15
UPK1BO75841 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1BO75841 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1BO75841 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1BO75841 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1BO75841 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1BO75841 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1BO75841 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1BO75841 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.11□□□□□ -0.15
UPK1BO75841 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1BO75841 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1BO75841 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1BO75841 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
UPK1BO75841 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
UPK1BO75841 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1BO75841 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.11□□□□□ -0.15
UPK1BO75841 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1BO75841 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
UPK1BO75841 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1BO75841 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.11□□□□□ -0.15
UPK1BO75841 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1BO75841 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.1□□□□□ -0.15
UPK1BO75841 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1BO75841 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK1BO75841 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1BO75841 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.1□□□□□ -0.15
UPK1BO75841 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK1BO75841 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1BO75841 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1BO75841 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK1BO75841 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1BO75841 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1BO75841 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
UPK1BO75841 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1BO75841 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1BO75841 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1BO75841 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.1□□□□□ -0.15
UPK1BO75841 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1BO75841 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1BO75841 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1BO75841 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1BO75841 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
UPK1BO75841 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
UPK1BO75841 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
UPK1BO75841 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1BO75841 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1BO75841 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK1BO75841 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK1BO75841 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK1BO75841 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1BO75841 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
UPK1BO75841 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1BO75841 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1BO75841 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1BO75841 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK1BO75841 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1BO75841 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK1BO75841 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1BO75841 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.1□□□□□ -0.15
UPK1BO75841 MIR4492-201ENST00000581627 80 ntBASIC14.1□□□□□ -0.15
UPK1BO75841 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.1□□□□□ -0.15
UPK1BO75841 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
UPK1BO75841 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.1□□□□□ -0.15
UPK1BO75841 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
UPK1BO75841 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
UPK1BO75841 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
UPK1BO75841 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.1□□□□□ -0.15
UPK1BO75841 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1BO75841 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1BO75841 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.1□□□□□ -0.15
UPK1BO75841 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
UPK1BO75841 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK1BO75841 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1BO75841 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
UPK1BO75841 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK1BO75841 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1BO75841 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK1BO75841 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
UPK1BO75841 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1BO75841 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1BO75841 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
UPK1BO75841 TOP3BP1-201ENST00000420768 1380 ntBASIC14.09□□□□□ -0.15
UPK1BO75841 ZBED1P1-201ENST00000502364 1930 ntBASIC14.09□□□□□ -0.15
UPK1BO75841 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1BO75841 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.09□□□□□ -0.15
UPK1BO75841 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1BO75841 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.09□□□□□ -0.15
UPK1BO75841 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1BO75841 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
UPK1BO75841 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1BO75841 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1BO75841 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1BO75841 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1BO75841 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
UPK1BO75841 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms