Protein–RNA interactions for Protein: O60671

RAD1, Cell cycle checkpoint protein RAD1, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD1O60671 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAD1O60671 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAD1O60671 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAD1O60671 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAD1O60671 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAD1O60671 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAD1O60671 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAD1O60671 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAD1O60671 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.34■□□□□ 0.05
RAD1O60671 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
RAD1O60671 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.34■□□□□ 0.05
RAD1O60671 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAD1O60671 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.34■□□□□ 0.05
RAD1O60671 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.34■□□□□ 0.05
RAD1O60671 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
RAD1O60671 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RAD1O60671 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.34■□□□□ 0.05
RAD1O60671 AC114501.2-201ENST00000439631 535 ntBASIC15.34■□□□□ 0.05
RAD1O60671 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.34■□□□□ 0.05
RAD1O60671 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.34■□□□□ 0.05
RAD1O60671 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAD1O60671 HILS1-202ENST00000545329 423 ntBASIC15.34■□□□□ 0.05
RAD1O60671 WASH4P-201ENST00000564273 1246 ntBASIC15.34■□□□□ 0.05
RAD1O60671 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.34■□□□□ 0.05
RAD1O60671 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.34■□□□□ 0.05
RAD1O60671 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.34■□□□□ 0.05
RAD1O60671 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
RAD1O60671 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.34■□□□□ 0.05
RAD1O60671 AC007431.3-201ENST00000623221 587 ntBASIC15.34■□□□□ 0.05
RAD1O60671 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAD1O60671 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAD1O60671 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.34■□□□□ 0.05
RAD1O60671 PCDHA14-201ENST00000506751 2298 ntBASIC15.34■□□□□ 0.05
RAD1O60671 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.34■□□□□ 0.05
RAD1O60671 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RAD1O60671 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.34■□□□□ 0.05
RAD1O60671 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RAD1O60671 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RAD1O60671 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RAD1O60671 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAD1O60671 KRT8P12-202ENST00000472924 1397 ntBASIC15.34■□□□□ 0.05
RAD1O60671 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAD1O60671 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAD1O60671 AL512652.2-201ENST00000625156 1716 ntBASIC15.34■□□□□ 0.05
RAD1O60671 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.34■□□□□ 0.05
RAD1O60671 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAD1O60671 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
RAD1O60671 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAD1O60671 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAD1O60671 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RAD1O60671 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.33■□□□□ 0.05
RAD1O60671 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RAD1O60671 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAD1O60671 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAD1O60671 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.33■□□□□ 0.05
RAD1O60671 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAD1O60671 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAD1O60671 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
RAD1O60671 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
RAD1O60671 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAD1O60671 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RAD1O60671 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.33■□□□□ 0.05
RAD1O60671 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD1O60671 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD1O60671 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD1O60671 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAD1O60671 AC005915.1-201ENST00000624912 2018 ntBASIC15.33■□□□□ 0.04
RAD1O60671 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD1O60671 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD1O60671 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
RAD1O60671 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
RAD1O60671 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAD1O60671 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD1O60671 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD1O60671 AL512384.1-201ENST00000406683 331 ntBASIC15.33■□□□□ 0.04
RAD1O60671 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.33■□□□□ 0.04
RAD1O60671 AGGF1P2-201ENST00000426656 2106 ntBASIC15.33■□□□□ 0.04
RAD1O60671 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD1O60671 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.33■□□□□ 0.04
RAD1O60671 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAD1O60671 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RAD1O60671 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.33■□□□□ 0.04
RAD1O60671 AC055876.2-201ENST00000531834 546 ntBASIC15.33■□□□□ 0.04
RAD1O60671 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD1O60671 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RAD1O60671 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RAD1O60671 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
RAD1O60671 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.33■□□□□ 0.04
RAD1O60671 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD1O60671 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAD1O60671 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD1O60671 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD1O60671 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.33■□□□□ 0.04
RAD1O60671 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD1O60671 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAD1O60671 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD1O60671 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RAD1O60671 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
RAD1O60671 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAD1O60671 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms