Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.26■□□□□ 0.19
SMAD6O43541 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD6O43541 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD6O43541 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.26■□□□□ 0.19
SMAD6O43541 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD6O43541 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD6O43541 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD6O43541 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD6O43541 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD6O43541 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD6O43541 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD6O43541 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD6O43541 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.26■□□□□ 0.19
SMAD6O43541 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.26■□□□□ 0.19
SMAD6O43541 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.26■□□□□ 0.19
SMAD6O43541 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SMAD6O43541 EEF1DP4-201ENST00000446006 880 ntBASIC16.26■□□□□ 0.19
SMAD6O43541 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.26■□□□□ 0.19
SMAD6O43541 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.26■□□□□ 0.19
SMAD6O43541 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SMAD6O43541 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.26■□□□□ 0.19
SMAD6O43541 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.26■□□□□ 0.19
SMAD6O43541 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.26■□□□□ 0.19
SMAD6O43541 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.26■□□□□ 0.19
SMAD6O43541 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.26■□□□□ 0.19
SMAD6O43541 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.26■□□□□ 0.19
SMAD6O43541 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.26■□□□□ 0.19
SMAD6O43541 AL109936.8-201ENST00000641772 604 ntBASIC16.26■□□□□ 0.19
SMAD6O43541 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD6O43541 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD6O43541 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SMAD6O43541 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.26■□□□□ 0.19
SMAD6O43541 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD6O43541 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.26■□□□□ 0.19
SMAD6O43541 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD6O43541 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.26■□□□□ 0.19
SMAD6O43541 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
SMAD6O43541 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD6O43541 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.26■□□□□ 0.19
SMAD6O43541 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD6O43541 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
SMAD6O43541 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SMAD6O43541 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD6O43541 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
SMAD6O43541 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.25■□□□□ 0.19
SMAD6O43541 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SMAD6O43541 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.25■□□□□ 0.19
SMAD6O43541 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD6O43541 AP001282.1-201ENST00000531301 1499 ntBASIC16.25■□□□□ 0.19
SMAD6O43541 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD6O43541 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD6O43541 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD6O43541 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD6O43541 FO393414.2-201ENST00000405153 598 ntBASIC16.25■□□□□ 0.19
SMAD6O43541 SPDYE18-201ENST00000510091 1050 ntBASIC16.25■□□□□ 0.19
SMAD6O43541 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.25■□□□□ 0.19
SMAD6O43541 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.25■□□□□ 0.19
SMAD6O43541 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.25■□□□□ 0.19
SMAD6O43541 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD6O43541 AC135586.1-201ENST00000539323 574 ntBASIC16.25■□□□□ 0.19
SMAD6O43541 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD6O43541 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.25■□□□□ 0.19
SMAD6O43541 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.25■□□□□ 0.19
SMAD6O43541 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
SMAD6O43541 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.25■□□□□ 0.19
SMAD6O43541 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.25■□□□□ 0.19
SMAD6O43541 AC004790.1-201ENST00000612686 536 ntBASIC16.25■□□□□ 0.19
SMAD6O43541 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD6O43541 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD6O43541 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.25■□□□□ 0.19
SMAD6O43541 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.25■□□□□ 0.19
SMAD6O43541 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD6O43541 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD6O43541 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.25■□□□□ 0.19
SMAD6O43541 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
SMAD6O43541 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD6O43541 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.25■□□□□ 0.19
SMAD6O43541 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.25■□□□□ 0.19
SMAD6O43541 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD6O43541 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SMAD6O43541 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD6O43541 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD6O43541 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD6O43541 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD6O43541 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD6O43541 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD6O43541 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.24■□□□□ 0.19
SMAD6O43541 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.24■□□□□ 0.19
SMAD6O43541 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD6O43541 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD6O43541 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD6O43541 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.24■□□□□ 0.19
SMAD6O43541 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD6O43541 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD6O43541 MIR648-201ENST00000385046 94 ntBASIC16.24■□□□□ 0.19
SMAD6O43541 AL035633.1-201ENST00000406139 838 ntBASIC16.24■□□□□ 0.19
SMAD6O43541 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.24■□□□□ 0.19
SMAD6O43541 SPTLC1P1-201ENST00000447199 261 ntBASIC16.24■□□□□ 0.19
SMAD6O43541 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.24■□□□□ 0.19
SMAD6O43541 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms