Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MSI1O43347 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.76■□□□□ 0.27
MSI1O43347 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.76■□□□□ 0.27
MSI1O43347 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.76■□□□□ 0.27
MSI1O43347 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MSI1O43347 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MSI1O43347 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.76■□□□□ 0.27
MSI1O43347 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MSI1O43347 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
MSI1O43347 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
MSI1O43347 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.76■□□□□ 0.27
MSI1O43347 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MSI1O43347 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MSI1O43347 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MSI1O43347 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
MSI1O43347 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MSI1O43347 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MSI1O43347 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.76■□□□□ 0.27
MSI1O43347 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.75■□□□□ 0.27
MSI1O43347 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MSI1O43347 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.75■□□□□ 0.27
MSI1O43347 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MSI1O43347 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MSI1O43347 AC134407.2-201ENST00000625089 1978 ntBASIC16.75■□□□□ 0.27
MSI1O43347 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MSI1O43347 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MSI1O43347 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
MSI1O43347 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.75■□□□□ 0.27
MSI1O43347 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.75■□□□□ 0.27
MSI1O43347 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MSI1O43347 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.75■□□□□ 0.27
MSI1O43347 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
MSI1O43347 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MSI1O43347 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
MSI1O43347 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.75■□□□□ 0.27
MSI1O43347 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.75■□□□□ 0.27
MSI1O43347 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.75■□□□□ 0.27
MSI1O43347 INGX-202ENST00000489074 768 ntBASIC16.75■□□□□ 0.27
MSI1O43347 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.75■□□□□ 0.27
MSI1O43347 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MSI1O43347 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.75■□□□□ 0.27
MSI1O43347 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.75■□□□□ 0.27
MSI1O43347 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.75■□□□□ 0.27
MSI1O43347 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.75■□□□□ 0.27
MSI1O43347 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.75■□□□□ 0.27
MSI1O43347 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.75■□□□□ 0.27
MSI1O43347 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MSI1O43347 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MSI1O43347 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MSI1O43347 AL691432.1-201ENST00000596308 1422 ntBASIC16.75■□□□□ 0.27
MSI1O43347 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.75■□□□□ 0.27
MSI1O43347 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MSI1O43347 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MSI1O43347 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MSI1O43347 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MSI1O43347 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MSI1O43347 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MSI1O43347 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.75■□□□□ 0.27
MSI1O43347 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MSI1O43347 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MSI1O43347 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MSI1O43347 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MSI1O43347 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MSI1O43347 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MSI1O43347 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.74■□□□□ 0.27
MSI1O43347 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MSI1O43347 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MSI1O43347 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.74■□□□□ 0.27
MSI1O43347 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.74■□□□□ 0.27
MSI1O43347 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.74■□□□□ 0.27
MSI1O43347 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MSI1O43347 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MSI1O43347 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.74■□□□□ 0.27
MSI1O43347 MST1L-201ENST00000442552 2185 ntBASIC16.74■□□□□ 0.27
MSI1O43347 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MSI1O43347 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
MSI1O43347 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.74■□□□□ 0.27
MSI1O43347 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MSI1O43347 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MSI1O43347 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
MSI1O43347 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MSI1O43347 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MSI1O43347 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MSI1O43347 AL096865.1-201ENST00000606796 927 ntBASIC16.74■□□□□ 0.27
MSI1O43347 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MSI1O43347 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MSI1O43347 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
MSI1O43347 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.74■□□□□ 0.27
MSI1O43347 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
MSI1O43347 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.74■□□□□ 0.27
MSI1O43347 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.74■□□□□ 0.27
MSI1O43347 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MSI1O43347 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
MSI1O43347 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MSI1O43347 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.73■□□□□ 0.27
MSI1O43347 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MSI1O43347 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
MSI1O43347 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MSI1O43347 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.73■□□□□ 0.27
MSI1O43347 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms