Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC013268.4-201ENST00000637413 2228 ntBASIC16.13■□□□□ 0.17
PHGDHO43175 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.12■□□□□ 0.17
PHGDHO43175 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PHGDHO43175 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
PHGDHO43175 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PHGDHO43175 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 AC007967.2-201ENST00000432613 625 ntBASIC16.12■□□□□ 0.17
PHGDHO43175 KRT18P2-201ENST00000447938 1258 ntBASIC16.12■□□□□ 0.17
PHGDHO43175 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.12■□□□□ 0.17
PHGDHO43175 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.12■□□□□ 0.17
PHGDHO43175 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.12■□□□□ 0.17
PHGDHO43175 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.12■□□□□ 0.17
PHGDHO43175 AC034105.1-201ENST00000563488 319 ntBASIC16.12■□□□□ 0.17
PHGDHO43175 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PHGDHO43175 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.12■□□□□ 0.17
PHGDHO43175 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.12■□□□□ 0.17
PHGDHO43175 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PHGDHO43175 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PHGDHO43175 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.12■□□□□ 0.17
PHGDHO43175 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.12■□□□□ 0.17
PHGDHO43175 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHGDHO43175 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.12■□□□□ 0.17
PHGDHO43175 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHGDHO43175 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHGDHO43175 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.11■□□□□ 0.17
PHGDHO43175 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHGDHO43175 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHGDHO43175 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHGDHO43175 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
PHGDHO43175 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHGDHO43175 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHGDHO43175 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.11■□□□□ 0.17
PHGDHO43175 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHGDHO43175 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.11■□□□□ 0.17
PHGDHO43175 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.11■□□□□ 0.17
PHGDHO43175 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PHGDHO43175 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHGDHO43175 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PHGDHO43175 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PHGDHO43175 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PHGDHO43175 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.11■□□□□ 0.17
PHGDHO43175 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHGDHO43175 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHGDHO43175 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHGDHO43175 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHGDHO43175 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.11■□□□□ 0.17
PHGDHO43175 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHGDHO43175 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.11■□□□□ 0.17
PHGDHO43175 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.11■□□□□ 0.17
PHGDHO43175 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PHGDHO43175 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHGDHO43175 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.11■□□□□ 0.17
PHGDHO43175 KRT19P2-202ENST00000557173 1012 ntBASIC16.11■□□□□ 0.17
PHGDHO43175 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.11■□□□□ 0.17
PHGDHO43175 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.11■□□□□ 0.17
PHGDHO43175 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.11■□□□□ 0.17
PHGDHO43175 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.11■□□□□ 0.17
PHGDHO43175 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PHGDHO43175 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.11■□□□□ 0.17
PHGDHO43175 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.11■□□□□ 0.17
PHGDHO43175 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PHGDHO43175 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.11■□□□□ 0.17
PHGDHO43175 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PHGDHO43175 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
PHGDHO43175 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PHGDHO43175 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.11■□□□□ 0.17
PHGDHO43175 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHGDHO43175 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHGDHO43175 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PHGDHO43175 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.11■□□□□ 0.17
PHGDHO43175 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PHGDHO43175 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHGDHO43175 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms