Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A1O14983 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A1O14983 KRT8P37-201ENST00000451609 1420 ntBASIC18.41■□□□□ 0.54
ATP2A1O14983 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A1O14983 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.41■□□□□ 0.54
ATP2A1O14983 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.41■□□□□ 0.54
ATP2A1O14983 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A1O14983 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A1O14983 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A1O14983 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A1O14983 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.41■□□□□ 0.54
ATP2A1O14983 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.41■□□□□ 0.54
ATP2A1O14983 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A1O14983 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.41■□□□□ 0.54
ATP2A1O14983 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.41■□□□□ 0.54
ATP2A1O14983 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.41■□□□□ 0.54
ATP2A1O14983 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ATP2A1O14983 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ATP2A1O14983 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A1O14983 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.41■□□□□ 0.54
ATP2A1O14983 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A1O14983 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.41■□□□□ 0.54
ATP2A1O14983 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A1O14983 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A1O14983 AC009053.2-201ENST00000563701 2365 ntBASIC18.41■□□□□ 0.54
ATP2A1O14983 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A1O14983 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A1O14983 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A1O14983 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.41■□□□□ 0.54
ATP2A1O14983 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A1O14983 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.41■□□□□ 0.54
ATP2A1O14983 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A1O14983 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ATP2A1O14983 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.41■□□□□ 0.54
ATP2A1O14983 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A1O14983 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A1O14983 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.41■□□□□ 0.54
ATP2A1O14983 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A1O14983 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A1O14983 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
ATP2A1O14983 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
ATP2A1O14983 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A1O14983 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A1O14983 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.4■□□□□ 0.54
ATP2A1O14983 UBALD1-205ENST00000590891 2641 ntBASIC18.4■□□□□ 0.54
ATP2A1O14983 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ATP2A1O14983 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.4■□□□□ 0.54
ATP2A1O14983 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A1O14983 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
ATP2A1O14983 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A1O14983 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ATP2A1O14983 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A1O14983 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A1O14983 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A1O14983 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A1O14983 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ATP2A1O14983 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.4■□□□□ 0.54
ATP2A1O14983 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.4■□□□□ 0.54
ATP2A1O14983 RPL13P2-201ENST00000440687 659 ntBASIC18.4■□□□□ 0.54
ATP2A1O14983 GPR53P-205ENST00000457298 1084 ntBASIC18.4■□□□□ 0.54
ATP2A1O14983 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.4■□□□□ 0.54
ATP2A1O14983 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A1O14983 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.4■□□□□ 0.54
ATP2A1O14983 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.4■□□□□ 0.54
ATP2A1O14983 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.4■□□□□ 0.54
ATP2A1O14983 AL008721.1-201ENST00000609964 604 ntBASIC18.4■□□□□ 0.54
ATP2A1O14983 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.4■□□□□ 0.54
ATP2A1O14983 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A1O14983 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.4■□□□□ 0.54
ATP2A1O14983 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.4■□□□□ 0.54
ATP2A1O14983 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A1O14983 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A1O14983 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.4■□□□□ 0.54
ATP2A1O14983 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A1O14983 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A1O14983 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A1O14983 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.4■□□□□ 0.54
ATP2A1O14983 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ATP2A1O14983 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ATP2A1O14983 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.4■□□□□ 0.54
ATP2A1O14983 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
ATP2A1O14983 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
ATP2A1O14983 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.39■□□□□ 0.54
ATP2A1O14983 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
ATP2A1O14983 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
ATP2A1O14983 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.39■□□□□ 0.54
ATP2A1O14983 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.54
ATP2A1O14983 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2A1O14983 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.39■□□□□ 0.53
ATP2A1O14983 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2A1O14983 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ATP2A1O14983 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2A1O14983 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2A1O14983 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
ATP2A1O14983 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2A1O14983 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2A1O14983 AZGP1P1-201ENST00000411909 902 ntBASIC18.39■□□□□ 0.53
ATP2A1O14983 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2A1O14983 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.39■□□□□ 0.53
ATP2A1O14983 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms