Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.69■□□□□ 0.1
UBFD1O14562 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.69■□□□□ 0.1
UBFD1O14562 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.69■□□□□ 0.1
UBFD1O14562 PRYP6-201ENST00000514804 343 ntBASIC15.69■□□□□ 0.1
UBFD1O14562 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.69■□□□□ 0.1
UBFD1O14562 AL109954.1-202ENST00000564051 2148 ntBASIC15.69■□□□□ 0.1
UBFD1O14562 AC064836.3-201ENST00000607928 673 ntBASIC15.69■□□□□ 0.1
UBFD1O14562 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBFD1O14562 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBFD1O14562 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.69■□□□□ 0.1
UBFD1O14562 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.69■□□□□ 0.1
UBFD1O14562 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
UBFD1O14562 AP002414.2-201ENST00000591780 3365 ntBASIC15.69■□□□□ 0.1
UBFD1O14562 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.69■□□□□ 0.1
UBFD1O14562 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBFD1O14562 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBFD1O14562 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBFD1O14562 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBFD1O14562 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBFD1O14562 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.69■□□□□ 0.1
UBFD1O14562 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.69■□□□□ 0.1
UBFD1O14562 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.69■□□□□ 0.1
UBFD1O14562 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.69■□□□□ 0.1
UBFD1O14562 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.69■□□□□ 0.1
UBFD1O14562 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBFD1O14562 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBFD1O14562 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBFD1O14562 PMS2P7-201ENST00000506558 1336 ntBASIC15.68■□□□□ 0.1
UBFD1O14562 WASH6P-202ENST00000359512 1437 ntBASIC15.68■□□□□ 0.1
UBFD1O14562 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.68■□□□□ 0.1
UBFD1O14562 AC104109.2-201ENST00000602919 1418 ntBASIC15.68■□□□□ 0.1
UBFD1O14562 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBFD1O14562 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.68■□□□□ 0.1
UBFD1O14562 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBFD1O14562 AC090616.6-203ENST00000579186 1945 ntBASIC15.68■□□□□ 0.1
UBFD1O14562 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.68■□□□□ 0.1
UBFD1O14562 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBFD1O14562 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBFD1O14562 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.68■□□□□ 0.1
UBFD1O14562 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.68■□□□□ 0.1
UBFD1O14562 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.68■□□□□ 0.1
UBFD1O14562 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.68■□□□□ 0.1
UBFD1O14562 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBFD1O14562 AC006058.4-201ENST00000624016 1670 ntBASIC15.68■□□□□ 0.1
UBFD1O14562 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.68■□□□□ 0.1
UBFD1O14562 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBFD1O14562 AP001282.1-201ENST00000531301 1499 ntBASIC15.68■□□□□ 0.1
UBFD1O14562 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
UBFD1O14562 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
UBFD1O14562 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.68■□□□□ 0.1
UBFD1O14562 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.68■□□□□ 0.1
UBFD1O14562 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.68■□□□□ 0.1
UBFD1O14562 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.68■□□□□ 0.1
UBFD1O14562 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.68■□□□□ 0.1
UBFD1O14562 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.68■□□□□ 0.1
UBFD1O14562 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.68■□□□□ 0.1
UBFD1O14562 AC145285.3-201ENST00000564603 959 ntBASIC15.68■□□□□ 0.1
UBFD1O14562 AL138918.1-201ENST00000568306 659 ntBASIC15.68■□□□□ 0.1
UBFD1O14562 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBFD1O14562 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBFD1O14562 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBFD1O14562 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBFD1O14562 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBFD1O14562 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.68■□□□□ 0.1
UBFD1O14562 AC138035.3-201ENST00000622706 2791 ntBASIC15.68■□□□□ 0.1
UBFD1O14562 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBFD1O14562 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBFD1O14562 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBFD1O14562 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBFD1O14562 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.68■□□□□ 0.1
UBFD1O14562 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
UBFD1O14562 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.68■□□□□ 0.1
UBFD1O14562 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.68■□□□□ 0.1
UBFD1O14562 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBFD1O14562 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBFD1O14562 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.67■□□□□ 0.1
UBFD1O14562 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBFD1O14562 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBFD1O14562 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBFD1O14562 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBFD1O14562 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBFD1O14562 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBFD1O14562 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.67■□□□□ 0.1
UBFD1O14562 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBFD1O14562 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBFD1O14562 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.67■□□□□ 0.1
UBFD1O14562 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBFD1O14562 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBFD1O14562 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBFD1O14562 AC018892.3-201ENST00000623986 2499 ntBASIC15.67■□□□□ 0.1
UBFD1O14562 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.67■□□□□ 0.1
UBFD1O14562 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.67■□□□□ 0.1
UBFD1O14562 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
UBFD1O14562 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.67■□□□□ 0.1
UBFD1O14562 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBFD1O14562 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBFD1O14562 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBFD1O14562 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBFD1O14562 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.67■□□□□ 0.1
UBFD1O14562 AL662844.1-201ENST00000546340 181 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms