Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX1O00570 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX1O00570 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
SOX1O00570 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX1O00570 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SOX1O00570 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.94■□□□□ 0.3
SOX1O00570 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX1O00570 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX1O00570 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SOX1O00570 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SOX1O00570 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SOX1O00570 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.94■□□□□ 0.3
SOX1O00570 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC16.94■□□□□ 0.3
SOX1O00570 AP001582.1-201ENST00000525856 295 ntBASIC16.94■□□□□ 0.3
SOX1O00570 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.94■□□□□ 0.3
SOX1O00570 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.94■□□□□ 0.3
SOX1O00570 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC16.94■□□□□ 0.3
SOX1O00570 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
SOX1O00570 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX1O00570 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX1O00570 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX1O00570 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX1O00570 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
SOX1O00570 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX1O00570 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX1O00570 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX1O00570 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.94■□□□□ 0.3
SOX1O00570 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX1O00570 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SOX1O00570 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX1O00570 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.93■□□□□ 0.3
SOX1O00570 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX1O00570 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX1O00570 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX1O00570 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX1O00570 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX1O00570 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX1O00570 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX1O00570 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.93■□□□□ 0.3
SOX1O00570 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.93■□□□□ 0.3
SOX1O00570 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.93■□□□□ 0.3
SOX1O00570 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.93■□□□□ 0.3
SOX1O00570 CEP164P1-201ENST00000455142 418 ntBASIC16.93■□□□□ 0.3
SOX1O00570 AC019193.1-201ENST00000506678 823 ntBASIC16.93■□□□□ 0.3
SOX1O00570 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.93■□□□□ 0.3
SOX1O00570 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.93■□□□□ 0.3
SOX1O00570 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.93■□□□□ 0.3
SOX1O00570 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SOX1O00570 RNF146-211ENST00000609447 607 ntTSL 4 BASIC16.93■□□□□ 0.3
SOX1O00570 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SOX1O00570 AL805961.1-201ENST00000642026 753 ntBASIC16.93■□□□□ 0.3
SOX1O00570 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.93■□□□□ 0.3
SOX1O00570 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX1O00570 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX1O00570 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.93■□□□□ 0.3
SOX1O00570 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.93■□□□□ 0.3
SOX1O00570 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SOX1O00570 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX1O00570 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX1O00570 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SOX1O00570 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX1O00570 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX1O00570 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX1O00570 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
SOX1O00570 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX1O00570 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
SOX1O00570 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SOX1O00570 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX1O00570 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX1O00570 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SOX1O00570 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX1O00570 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX1O00570 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SOX1O00570 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.92■□□□□ 0.3
SOX1O00570 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX1O00570 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX1O00570 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX1O00570 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SOX1O00570 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.92■□□□□ 0.3
SOX1O00570 AL512430.1-201ENST00000392575 860 ntBASIC16.92■□□□□ 0.3
SOX1O00570 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX1O00570 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SOX1O00570 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SOX1O00570 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SOX1O00570 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.92■□□□□ 0.3
SOX1O00570 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
SOX1O00570 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SOX1O00570 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.92■□□□□ 0.3
SOX1O00570 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.92■□□□□ 0.3
SOX1O00570 AC005730.2-201ENST00000564549 1184 ntBASIC16.92■□□□□ 0.3
SOX1O00570 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.92■□□□□ 0.3
SOX1O00570 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.92■□□□□ 0.3
SOX1O00570 GMFG-209ENST00000600322 622 ntTSL 5 BASIC16.92■□□□□ 0.3
SOX1O00570 ECM1P1-201ENST00000604092 1279 ntBASIC16.92■□□□□ 0.3
SOX1O00570 AC092171.5-201ENST00000608012 942 ntBASIC16.92■□□□□ 0.3
SOX1O00570 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.92■□□□□ 0.3
SOX1O00570 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SOX1O00570 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.92■□□□□ 0.3
SOX1O00570 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX1O00570 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms