Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 COX11-202ENST00000571584 1108 ntTSL 2 BASIC20.59■□□□□ 0.89
CHL1O00533 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC20.59■□□□□ 0.89
CHL1O00533 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC20.59■□□□□ 0.89
CHL1O00533 AC105233.6-201ENST00000642093 218 ntBASIC20.59■□□□□ 0.89
CHL1O00533 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHL1O00533 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CHL1O00533 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHL1O00533 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHL1O00533 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHL1O00533 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHL1O00533 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.59■□□□□ 0.89
CHL1O00533 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHL1O00533 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CHL1O00533 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHL1O00533 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHL1O00533 SLC7A15P-201ENST00000424028 1363 ntBASIC20.59■□□□□ 0.89
CHL1O00533 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHL1O00533 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHL1O00533 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
CHL1O00533 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHL1O00533 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHL1O00533 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHL1O00533 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CHL1O00533 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHL1O00533 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHL1O00533 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHL1O00533 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHL1O00533 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHL1O00533 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC20.58■□□□□ 0.89
CHL1O00533 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC20.58■□□□□ 0.89
CHL1O00533 MEIS3P1-201ENST00000495167 958 ntBASIC20.58■□□□□ 0.89
CHL1O00533 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHL1O00533 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC20.58■□□□□ 0.89
CHL1O00533 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC20.58■□□□□ 0.89
CHL1O00533 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.58■□□□□ 0.89
CHL1O00533 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHL1O00533 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC20.58■□□□□ 0.89
CHL1O00533 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CHL1O00533 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC20.58■□□□□ 0.89
CHL1O00533 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHL1O00533 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC20.58■□□□□ 0.88
CHL1O00533 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHL1O00533 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHL1O00533 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHL1O00533 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHL1O00533 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHL1O00533 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHL1O00533 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
CHL1O00533 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CHL1O00533 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC20.57■□□□□ 0.88
CHL1O00533 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.57■□□□□ 0.88
CHL1O00533 SUPT20HL2-201ENST00000486479 2409 ntBASIC20.57■□□□□ 0.88
CHL1O00533 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
CHL1O00533 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHL1O00533 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CHL1O00533 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC20.57■□□□□ 0.88
CHL1O00533 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHL1O00533 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CHL1O00533 TOMM22P5-201ENST00000416399 439 ntBASIC20.57■□□□□ 0.88
CHL1O00533 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHL1O00533 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CHL1O00533 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC20.57■□□□□ 0.88
CHL1O00533 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC20.57■□□□□ 0.88
CHL1O00533 AP005018.1-201ENST00000525475 301 ntBASIC20.57■□□□□ 0.88
CHL1O00533 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC20.57■□□□□ 0.88
CHL1O00533 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC20.57■□□□□ 0.88
CHL1O00533 TP53TG3HP-202ENST00000569755 579 ntBASIC20.57■□□□□ 0.88
CHL1O00533 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHL1O00533 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC20.57■□□□□ 0.88
CHL1O00533 AC018695.7-201ENST00000624587 2492 ntBASIC20.57■□□□□ 0.88
CHL1O00533 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHL1O00533 AL391005.1-201ENST00000623953 2435 ntBASIC20.57■□□□□ 0.88
CHL1O00533 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC20.57■□□□□ 0.88
CHL1O00533 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHL1O00533 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHL1O00533 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC20.57■□□□□ 0.88
CHL1O00533 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHL1O00533 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHL1O00533 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CHL1O00533 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHL1O00533 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC20.56■□□□□ 0.88
CHL1O00533 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC20.56■□□□□ 0.88
CHL1O00533 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHL1O00533 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHL1O00533 COPE-202ENST00000349893 948 ntTSL 2 BASIC20.56■□□□□ 0.88
CHL1O00533 RAC2-202ENST00000401529 569 ntTSL 4 BASIC20.56■□□□□ 0.88
CHL1O00533 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC20.56■□□□□ 0.88
CHL1O00533 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC20.56■□□□□ 0.88
CHL1O00533 USP40-206ENST00000443711 628 ntTSL 2 BASIC20.56■□□□□ 0.88
CHL1O00533 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC20.56■□□□□ 0.88
CHL1O00533 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC20.56■□□□□ 0.88
CHL1O00533 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHL1O00533 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
CHL1O00533 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
CHL1O00533 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC20.56■□□□□ 0.88
CHL1O00533 AC099568.2-201ENST00000609194 695 ntBASIC20.56■□□□□ 0.88
CHL1O00533 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHL1O00533 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC20.56■□□□□ 0.88
CHL1O00533 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHL1O00533 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms