Protein–RNA interactions for Protein: A6PVL3

KNCN, Kinocilin, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNCNA6PVL3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KNCNA6PVL3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KNCNA6PVL3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KNCNA6PVL3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KNCNA6PVL3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KNCNA6PVL3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KNCNA6PVL3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KNCNA6PVL3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
KNCNA6PVL3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 ADH5P3-201ENST00000433842 1137 ntBASIC12.16□□□□□ -0.46
KNCNA6PVL3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
KNCNA6PVL3 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 AC243562.1-201ENST00000560672 389 ntBASIC12.16□□□□□ -0.46
KNCNA6PVL3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KNCNA6PVL3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KNCNA6PVL3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KNCNA6PVL3 U82695.1-201ENST00000635752 1889 ntBASIC12.16□□□□□ -0.46
KNCNA6PVL3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KNCNA6PVL3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KNCNA6PVL3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KNCNA6PVL3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
KNCNA6PVL3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KNCNA6PVL3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC12.16□□□□□ -0.46
KNCNA6PVL3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KNCNA6PVL3 UXT-AS1-201ENST00000590504 1525 ntBASIC12.16□□□□□ -0.46
KNCNA6PVL3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
KNCNA6PVL3 AL596087.1-201ENST00000400979 1969 ntBASIC12.16□□□□□ -0.46
KNCNA6PVL3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KNCNA6PVL3 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KNCNA6PVL3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KNCNA6PVL3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
KNCNA6PVL3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
KNCNA6PVL3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
KNCNA6PVL3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.15□□□□□ -0.46
KNCNA6PVL3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KNCNA6PVL3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
KNCNA6PVL3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
KNCNA6PVL3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KNCNA6PVL3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
KNCNA6PVL3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
KNCNA6PVL3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KNCNA6PVL3 HYMAI-201ENST00000635591 3347 ntBASIC12.15□□□□□ -0.46
KNCNA6PVL3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC12.15□□□□□ -0.46
KNCNA6PVL3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.15□□□□□ -0.46
KNCNA6PVL3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
KNCNA6PVL3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.15□□□□□ -0.46
KNCNA6PVL3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KNCNA6PVL3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
KNCNA6PVL3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KNCNA6PVL3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KNCNA6PVL3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.15□□□□□ -0.46
KNCNA6PVL3 SPCS2P4-201ENST00000436160 681 ntBASIC12.15□□□□□ -0.46
KNCNA6PVL3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KNCNA6PVL3 AL592309.1-201ENST00000443127 649 ntBASIC12.15□□□□□ -0.46
KNCNA6PVL3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KNCNA6PVL3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.15□□□□□ -0.46
KNCNA6PVL3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.15□□□□□ -0.46
KNCNA6PVL3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.15□□□□□ -0.46
KNCNA6PVL3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.15□□□□□ -0.46
KNCNA6PVL3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
KNCNA6PVL3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.15□□□□□ -0.46
KNCNA6PVL3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.15□□□□□ -0.46
KNCNA6PVL3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
KNCNA6PVL3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.15□□□□□ -0.46
KNCNA6PVL3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KNCNA6PVL3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
KNCNA6PVL3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.15□□□□□ -0.46
KNCNA6PVL3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
KNCNA6PVL3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.15□□□□□ -0.46
KNCNA6PVL3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KNCNA6PVL3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms