Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.5□□□□□ -0.09
TVP23AA6NH52 AP001005.1-201ENST00000571755 1248 ntBASIC14.5□□□□□ -0.09
TVP23AA6NH52 MIR3909-201ENST00000579518 119 ntBASIC14.5□□□□□ -0.09
TVP23AA6NH52 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TVP23AA6NH52 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TVP23AA6NH52 AC092919.2-201ENST00000623631 1645 ntBASIC14.5□□□□□ -0.09
TVP23AA6NH52 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.5□□□□□ -0.09
TVP23AA6NH52 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TVP23AA6NH52 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TVP23AA6NH52 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.5□□□□□ -0.09
TVP23AA6NH52 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TVP23AA6NH52 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TVP23AA6NH52 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TVP23AA6NH52 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TVP23AA6NH52 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.5□□□□□ -0.09
TVP23AA6NH52 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TVP23AA6NH52 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.5□□□□□ -0.09
TVP23AA6NH52 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TVP23AA6NH52 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TVP23AA6NH52 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TVP23AA6NH52 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TVP23AA6NH52 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TVP23AA6NH52 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TVP23AA6NH52 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TVP23AA6NH52 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TVP23AA6NH52 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.49□□□□□ -0.09
TVP23AA6NH52 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
TVP23AA6NH52 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.49□□□□□ -0.09
TVP23AA6NH52 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TVP23AA6NH52 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.49□□□□□ -0.09
TVP23AA6NH52 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TVP23AA6NH52 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TVP23AA6NH52 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.49□□□□□ -0.09
TVP23AA6NH52 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.49□□□□□ -0.09
TVP23AA6NH52 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TVP23AA6NH52 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
TVP23AA6NH52 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.49□□□□□ -0.09
TVP23AA6NH52 RNA5SP419-201ENST00000515908 135 ntBASIC14.49□□□□□ -0.09
TVP23AA6NH52 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.49□□□□□ -0.09
TVP23AA6NH52 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.49□□□□□ -0.09
TVP23AA6NH52 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.49□□□□□ -0.09
TVP23AA6NH52 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.49□□□□□ -0.09
TVP23AA6NH52 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.49□□□□□ -0.09
TVP23AA6NH52 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TVP23AA6NH52 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.49□□□□□ -0.09
TVP23AA6NH52 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.49□□□□□ -0.09
TVP23AA6NH52 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TVP23AA6NH52 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TVP23AA6NH52 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TVP23AA6NH52 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TVP23AA6NH52 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TVP23AA6NH52 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TVP23AA6NH52 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TVP23AA6NH52 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TVP23AA6NH52 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TVP23AA6NH52 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.49□□□□□ -0.09
TVP23AA6NH52 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
TVP23AA6NH52 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.49□□□□□ -0.09
TVP23AA6NH52 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TVP23AA6NH52 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TVP23AA6NH52 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TVP23AA6NH52 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TVP23AA6NH52 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TVP23AA6NH52 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TVP23AA6NH52 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TVP23AA6NH52 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TVP23AA6NH52 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TVP23AA6NH52 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TVP23AA6NH52 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
TVP23AA6NH52 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.48□□□□□ -0.09
TVP23AA6NH52 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TVP23AA6NH52 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TVP23AA6NH52 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.48□□□□□ -0.09
TVP23AA6NH52 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TVP23AA6NH52 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TVP23AA6NH52 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TVP23AA6NH52 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TVP23AA6NH52 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.48□□□□□ -0.09
TVP23AA6NH52 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TVP23AA6NH52 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TVP23AA6NH52 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TVP23AA6NH52 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.48□□□□□ -0.09
TVP23AA6NH52 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.48□□□□□ -0.09
TVP23AA6NH52 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TVP23AA6NH52 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.48□□□□□ -0.09
TVP23AA6NH52 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.48□□□□□ -0.09
TVP23AA6NH52 AC096734.2-201ENST00000562054 433 ntBASIC14.48□□□□□ -0.09
TVP23AA6NH52 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.48□□□□□ -0.09
TVP23AA6NH52 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.48□□□□□ -0.09
TVP23AA6NH52 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.48□□□□□ -0.09
TVP23AA6NH52 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TVP23AA6NH52 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TVP23AA6NH52 AC073347.1-201ENST00000421633 2643 ntBASIC14.48□□□□□ -0.09
TVP23AA6NH52 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.48□□□□□ -0.09
TVP23AA6NH52 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TVP23AA6NH52 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.48□□□□□ -0.09
TVP23AA6NH52 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.48□□□□□ -0.09
TVP23AA6NH52 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.48□□□□□ -0.09
TVP23AA6NH52 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TVP23AA6NH52 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms