Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC11.39□□□□□ -0.59
LINC01546A6NGU7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 SNORA78-201ENST00000459373 127 ntBASIC11.39□□□□□ -0.59
LINC01546A6NGU7 KRT8P26-201ENST00000534154 1276 ntBASIC11.39□□□□□ -0.59
LINC01546A6NGU7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 DUT-205ENST00000558813 769 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 BNIP3P18-201ENST00000593976 575 ntBASIC11.39□□□□□ -0.59
LINC01546A6NGU7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 AC064862.7-201ENST00000604520 867 ntBASIC11.39□□□□□ -0.59
LINC01546A6NGU7 AC145285.6-201ENST00000604632 637 ntBASIC11.39□□□□□ -0.59
LINC01546A6NGU7 AC091076.1-201ENST00000610741 619 ntBASIC11.39□□□□□ -0.59
LINC01546A6NGU7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 AC083849.1-201ENST00000615227 514 ntBASIC11.39□□□□□ -0.59
LINC01546A6NGU7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 TMEM191A-211ENST00000637163 1067 ntBASIC11.39□□□□□ -0.59
LINC01546A6NGU7 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 AC010327.5-201ENST00000586923 3061 ntBASIC11.39□□□□□ -0.59
LINC01546A6NGU7 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 AL928921.2-201ENST00000641325 2442 ntBASIC11.38□□□□□ -0.59
LINC01546A6NGU7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 ABR-228ENST00000574437 3196 ntTSL 5 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 CD99-202ENST00000381180 530 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 TSPY5P-201ENST00000426936 936 ntBASIC11.38□□□□□ -0.59
LINC01546A6NGU7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms