Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 AL162727.3-201ENST00000635661 2787 ntBASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 AC107890.1-201ENST00000422478 521 ntBASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.01■□□□□ 0.63
PTPDC1A2A3K4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTPDC1A2A3K4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC19■□□□□ 0.63
PTPDC1A2A3K4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTPDC1A2A3K4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PTPDC1A2A3K4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPDC1A2A3K4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PTPDC1A2A3K4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19■□□□□ 0.63
PTPDC1A2A3K4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19■□□□□ 0.63
PTPDC1A2A3K4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PTPDC1A2A3K4 AC105917.1-201ENST00000506637 2539 ntBASIC19■□□□□ 0.63
PTPDC1A2A3K4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTPDC1A2A3K4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPDC1A2A3K4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPDC1A2A3K4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPDC1A2A3K4 CD81-202ENST00000381036 880 ntTSL 3 BASIC19■□□□□ 0.63
PTPDC1A2A3K4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTPDC1A2A3K4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PTPDC1A2A3K4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTPDC1A2A3K4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19■□□□□ 0.63
PTPDC1A2A3K4 PRYP6-201ENST00000514804 343 ntBASIC19■□□□□ 0.63
PTPDC1A2A3K4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19■□□□□ 0.63
PTPDC1A2A3K4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19■□□□□ 0.63
PTPDC1A2A3K4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19■□□□□ 0.63
PTPDC1A2A3K4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19■□□□□ 0.63
PTPDC1A2A3K4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19■□□□□ 0.63
PTPDC1A2A3K4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPDC1A2A3K4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19■□□□□ 0.63
PTPDC1A2A3K4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PTPDC1A2A3K4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPDC1A2A3K4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PTPDC1A2A3K4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPDC1A2A3K4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PTPDC1A2A3K4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTPDC1A2A3K4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTPDC1A2A3K4 AL589702.1-201ENST00000641229 1509 ntBASIC19■□□□□ 0.63
PTPDC1A2A3K4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 AC105233.2-201ENST00000523697 349 ntBASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 AF228730.5-201ENST00000530288 346 ntBASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PTPDC1A2A3K4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms