Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LOC102724428A0A0B4J2F2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC20.27■□□□□ 0.84
LOC102724428A0A0B4J2F2 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LOC102724428A0A0B4J2F2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LOC102724428A0A0B4J2F2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LOC102724428A0A0B4J2F2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
LOC102724428A0A0B4J2F2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LOC102724428A0A0B4J2F2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LOC102724428A0A0B4J2F2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LOC102724428A0A0B4J2F2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
LOC102724428A0A0B4J2F2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LOC102724428A0A0B4J2F2 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC20.27■□□□□ 0.84
LOC102724428A0A0B4J2F2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LOC102724428A0A0B4J2F2 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LOC102724428A0A0B4J2F2 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC20.27■□□□□ 0.84
LOC102724428A0A0B4J2F2 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LOC102724428A0A0B4J2F2 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
LOC102724428A0A0B4J2F2 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC20.27■□□□□ 0.84
LOC102724428A0A0B4J2F2 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
LOC102724428A0A0B4J2F2 AL450472.2-201ENST00000603663 1156 ntBASIC20.27■□□□□ 0.84
LOC102724428A0A0B4J2F2 AC097359.3-201ENST00000603982 1210 ntBASIC20.27■□□□□ 0.84
LOC102724428A0A0B4J2F2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LOC102724428A0A0B4J2F2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LOC102724428A0A0B4J2F2 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LOC102724428A0A0B4J2F2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.27■□□□□ 0.84
LOC102724428A0A0B4J2F2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LOC102724428A0A0B4J2F2 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LOC102724428A0A0B4J2F2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LOC102724428A0A0B4J2F2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.83
LOC102724428A0A0B4J2F2 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC20.27■□□□□ 0.83
LOC102724428A0A0B4J2F2 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LOC102724428A0A0B4J2F2 DRD5P1-201ENST00000456605 1438 ntBASIC20.27■□□□□ 0.83
LOC102724428A0A0B4J2F2 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC20.27■□□□□ 0.83
LOC102724428A0A0B4J2F2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 AP001282.1-201ENST00000531301 1499 ntBASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 KRT18P43-201ENST00000469825 1281 ntBASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 AC025279.2-201ENST00000569730 653 ntBASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 IFT20-206ENST00000578122 834 ntTSL 2 BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 IFT20-208ENST00000578985 831 ntTSL 3 BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 AL645608.8-201ENST00000606034 2086 ntBASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 AC106820.2-201ENST00000563775 3264 ntBASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LOC102724428A0A0B4J2F2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 FZD10-202ENST00000539839 3282 ntBASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 AC023310.1-201ENST00000554836 735 ntBASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 RHOQP1-201ENST00000555758 579 ntBASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms