Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 KRT8P19-201ENST00000551916 1455 ntBASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 AC091046.1-201ENST00000331871 207 ntBASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 RPS2P36-201ENST00000456516 831 ntBASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 FADS2-212ENST00000522639 360 ntTSL 5 BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 FADS2-215ENST00000574708 385 ntTSL 3 BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 SPCS2P2-201ENST00000603270 608 ntBASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCH2Q9Y6C5 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 KRT18P64-201ENST00000434946 1219 ntBASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 CHMP4BP1-201ENST00000556017 588 ntBASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 KRT8P37-201ENST00000451609 1420 ntBASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.03■□□□□ 0.48
PTCH2Q9Y6C5 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 AHCYP2-201ENST00000430630 1300 ntBASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms