Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 AC004461.1-201ENST00000412461 403 ntBASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 AC005237.2-201ENST00000434368 219 ntBASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 AC069335.1-201ENST00000489972 472 ntBASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 AL353708.1-201ENST00000567904 1257 ntBASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 AC024267.1-201ENST00000582320 895 ntBASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 AL513523.2-202ENST00000427283 2040 ntBASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 HTR4-207ENST00000520514 1236 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 AC004835.2-201ENST00000603762 682 ntBASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 AC023511.2-201ENST00000618803 211 ntBASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB13Q9Y5F0 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PCDHB13Q9Y5F0 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 AC254562.1-201ENST00000417586 456 ntBASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 AL392088.1-201ENST00000428364 670 ntBASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 MIR4321-201ENST00000592276 80 ntBASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 AC135178.5-201ENST00000602597 674 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms