Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 RHOQP3-201ENST00000437982 621 ntBASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 FDX1P1-201ENST00000449115 551 ntBASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 RPL13AP23-201ENST00000480739 586 ntBASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 AC034105.1-201ENST00000563488 319 ntBASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 AC145285.3-201ENST00000564603 959 ntBASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 AL031055.1-201ENST00000606362 631 ntBASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 AC020765.3-201ENST00000613051 740 ntBASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RHBDD3Q9Y3P4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 IL9RP2-201ENST00000423948 1312 ntBASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RHBDD3Q9Y3P4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
RHBDD3Q9Y3P4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.21□□□□□ -0.13
RHBDD3Q9Y3P4 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
RHBDD3Q9Y3P4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
RHBDD3Q9Y3P4 AC022532.1-201ENST00000624563 1728 ntBASIC14.21□□□□□ -0.13
RHBDD3Q9Y3P4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RHBDD3Q9Y3P4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.21□□□□□ -0.13
RHBDD3Q9Y3P4 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
RHBDD3Q9Y3P4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms