Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
UBE2D4Q9Y2X8 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
UBE2D4Q9Y2X8 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D4Q9Y2X8 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC11.31□□□□□ -0.6
UBE2D4Q9Y2X8 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
UBE2D4Q9Y2X8 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
UBE2D4Q9Y2X8 PGR-210ENST00000619228 3038 ntTSL 5 BASIC11.31□□□□□ -0.6
UBE2D4Q9Y2X8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
UBE2D4Q9Y2X8 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D4Q9Y2X8 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D4Q9Y2X8 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
UBE2D4Q9Y2X8 CICP13-201ENST00000422015 2789 ntBASIC11.31□□□□□ -0.6
UBE2D4Q9Y2X8 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D4Q9Y2X8 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D4Q9Y2X8 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D4Q9Y2X8 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D4Q9Y2X8 CYP51A1P2-201ENST00000419457 1499 ntBASIC11.31□□□□□ -0.6
UBE2D4Q9Y2X8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D4Q9Y2X8 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
UBE2D4Q9Y2X8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D4Q9Y2X8 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D4Q9Y2X8 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D4Q9Y2X8 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC11.31□□□□□ -0.6
UBE2D4Q9Y2X8 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D4Q9Y2X8 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 AC138035.3-201ENST00000622706 2791 ntBASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 CD99-202ENST00000381180 530 ntTSL 2 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 AC008608.2-201ENST00000606089 416 ntBASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2D4Q9Y2X8 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 TCAF2P1-201ENST00000291129 2421 ntBASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms