Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 GK-202ENST00000378941 458 ntTSL 3 BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 WFDC1-204ENST00000613603 549 ntBASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 OR6D1P-202ENST00000641007 5290 ntBASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 U91328.1-201ENST00000437528 223 ntBASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 RPL13AP25-201ENST00000484130 612 ntBASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 AL607033.1-201ENST00000623900 1599 ntBASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.42■□□□□ 0.54
SYNPO2Q9UMS6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 AC090340.1-201ENST00000620778 4980 ntBASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 CLK3P2-201ENST00000427566 1453 ntBASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 FAM86LP-201ENST00000478302 853 ntBASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 AL162274.1-201ENST00000617191 1098 ntBASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPO2Q9UMS6 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 CDC14C-201ENST00000428251 1719 ntBASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 AC069224.1-201ENST00000566372 1715 ntBASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms