Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.67■□□□□ 0.26
RABGEF1Q9UJ41 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.67■□□□□ 0.26
RABGEF1Q9UJ41 CXCL1P1-201ENST00000502804 216 ntBASIC16.67■□□□□ 0.26
RABGEF1Q9UJ41 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.67■□□□□ 0.26
RABGEF1Q9UJ41 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RABGEF1Q9UJ41 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC16.67■□□□□ 0.26
RABGEF1Q9UJ41 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.67■□□□□ 0.26
RABGEF1Q9UJ41 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.67■□□□□ 0.26
RABGEF1Q9UJ41 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.67■□□□□ 0.26
RABGEF1Q9UJ41 AC023141.13-201ENST00000604991 943 ntBASIC16.67■□□□□ 0.26
RABGEF1Q9UJ41 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RABGEF1Q9UJ41 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RABGEF1Q9UJ41 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.67■□□□□ 0.26
RABGEF1Q9UJ41 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RABGEF1Q9UJ41 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RABGEF1Q9UJ41 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RABGEF1Q9UJ41 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.67■□□□□ 0.26
RABGEF1Q9UJ41 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.67■□□□□ 0.26
RABGEF1Q9UJ41 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.67■□□□□ 0.26
RABGEF1Q9UJ41 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RABGEF1Q9UJ41 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.67■□□□□ 0.26
RABGEF1Q9UJ41 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.67■□□□□ 0.26
RABGEF1Q9UJ41 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RABGEF1Q9UJ41 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RABGEF1Q9UJ41 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RABGEF1Q9UJ41 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RABGEF1Q9UJ41 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 PRAL-201ENST00000624952 3286 ntBASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 PKD1P5-201ENST00000532415 10291 ntBASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 MIR648-201ENST00000385046 94 ntBASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 AC027612.4-201ENST00000605371 583 ntBASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 AC091812.2-201ENST00000619081 385 ntBASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.66■□□□□ 0.26
RABGEF1Q9UJ41 AC016027.1-202ENST00000607927 1699 ntBASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 AL592424.1-201ENST00000563624 1536 ntBASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 SEC63P1-201ENST00000425785 1258 ntBASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 RFPL4AP1-201ENST00000530883 850 ntBASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 AC023824.1-201ENST00000562945 2975 ntBASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 AC005412.3-201ENST00000580309 715 ntBASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 AP001350.2-201ENST00000625104 1094 ntBASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 AC007064.4-201ENST00000637740 555 ntBASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RABGEF1Q9UJ41 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms