Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
DUX4Q9UBX2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
DUX4Q9UBX2 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.33□□□□□ -0.11
DUX4Q9UBX2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
DUX4Q9UBX2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
DUX4Q9UBX2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
DUX4Q9UBX2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
DUX4Q9UBX2 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
DUX4Q9UBX2 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC14.33□□□□□ -0.11
DUX4Q9UBX2 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
DUX4Q9UBX2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.33□□□□□ -0.11
DUX4Q9UBX2 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 PTCHD3P3-201ENST00000403073 906 ntBASIC14.33□□□□□ -0.12
DUX4Q9UBX2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 AC105339.3-201ENST00000560043 636 ntBASIC14.33□□□□□ -0.12
DUX4Q9UBX2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 AC006557.2-201ENST00000592985 1240 ntBASIC14.33□□□□□ -0.12
DUX4Q9UBX2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 AC117500.6-201ENST00000624871 588 ntBASIC14.33□□□□□ -0.12
DUX4Q9UBX2 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DUX4Q9UBX2 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 PEG13-201ENST00000631594 5667 ntBASIC14.32□□□□□ -0.12
DUX4Q9UBX2 AL009178.2-201ENST00000597278 2719 ntBASIC14.32□□□□□ -0.12
DUX4Q9UBX2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 AC098831.1-202ENST00000438821 336 ntBASIC14.32□□□□□ -0.12
DUX4Q9UBX2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 AL356488.2-201ENST00000602755 427 ntBASIC14.32□□□□□ -0.12
DUX4Q9UBX2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.32□□□□□ -0.12
DUX4Q9UBX2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DUX4Q9UBX2 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.32□□□□□ -0.12
DUX4Q9UBX2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms