Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
DNMT3BQ9UBC3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DNMT3BQ9UBC3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DNMT3BQ9UBC3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DNMT3BQ9UBC3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DNMT3BQ9UBC3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DNMT3BQ9UBC3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DNMT3BQ9UBC3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
DNMT3BQ9UBC3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.77■□□□□ 0.28
DNMT3BQ9UBC3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.77■□□□□ 0.28
DNMT3BQ9UBC3 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.77■□□□□ 0.28
DNMT3BQ9UBC3 AC104596.2-201ENST00000512793 793 ntBASIC16.77■□□□□ 0.28
DNMT3BQ9UBC3 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.77■□□□□ 0.28
DNMT3BQ9UBC3 AC092552.1-201ENST00000547243 906 ntBASIC16.77■□□□□ 0.28
DNMT3BQ9UBC3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.77■□□□□ 0.28
DNMT3BQ9UBC3 MIR4259-201ENST00000584466 101 ntBASIC16.77■□□□□ 0.28
DNMT3BQ9UBC3 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.77■□□□□ 0.28
DNMT3BQ9UBC3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
DNMT3BQ9UBC3 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
DNMT3BQ9UBC3 MIR6799-201ENST00000620297 69 ntBASIC16.77■□□□□ 0.28
DNMT3BQ9UBC3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.77■□□□□ 0.28
DNMT3BQ9UBC3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DNMT3BQ9UBC3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DNMT3BQ9UBC3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.77■□□□□ 0.28
DNMT3BQ9UBC3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.77■□□□□ 0.28
DNMT3BQ9UBC3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
DNMT3BQ9UBC3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
DNMT3BQ9UBC3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
DNMT3BQ9UBC3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
DNMT3BQ9UBC3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.77■□□□□ 0.27
DNMT3BQ9UBC3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
DNMT3BQ9UBC3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.77■□□□□ 0.27
DNMT3BQ9UBC3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
DNMT3BQ9UBC3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
DNMT3BQ9UBC3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.77■□□□□ 0.27
DNMT3BQ9UBC3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.77■□□□□ 0.27
DNMT3BQ9UBC3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
DNMT3BQ9UBC3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 AC090340.1-201ENST00000620778 4980 ntBASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 AC004987.2-201ENST00000395959 1148 ntBASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 POU5F1P6-201ENST00000466990 990 ntBASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
DNMT3BQ9UBC3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 AZGP1P1-201ENST00000411909 902 ntBASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 RN7SL399P-201ENST00000471648 279 ntBASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 AC008735.3-201ENST00000596646 500 ntBASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 AL391069.4-201ENST00000609583 481 ntBASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms