Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PARPBPQ9NWS1 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PARPBPQ9NWS1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PARPBPQ9NWS1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PARPBPQ9NWS1 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.55□□□□□ -0.08
PARPBPQ9NWS1 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PARPBPQ9NWS1 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PARPBPQ9NWS1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.55□□□□□ -0.08
PARPBPQ9NWS1 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PARPBPQ9NWS1 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.55□□□□□ -0.08
PARPBPQ9NWS1 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.55□□□□□ -0.08
PARPBPQ9NWS1 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PARPBPQ9NWS1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 AC069335.1-201ENST00000489972 472 ntBASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 AL365330.1-201ENST00000607459 531 ntBASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.54□□□□□ -0.08
PARPBPQ9NWS1 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 AC023141.5-201ENST00000458585 616 ntBASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 AC092171.3-201ENST00000610122 2651 ntBASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 AL161772.1-201ENST00000610494 4412 ntBASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PARPBPQ9NWS1 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PARPBPQ9NWS1 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PARPBPQ9NWS1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PARPBPQ9NWS1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
PARPBPQ9NWS1 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PARPBPQ9NWS1 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PARPBPQ9NWS1 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.52□□□□□ -0.08
PARPBPQ9NWS1 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PARPBPQ9NWS1 AL589702.1-201ENST00000641229 1509 ntBASIC14.52□□□□□ -0.08
PARPBPQ9NWS1 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PARPBPQ9NWS1 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PARPBPQ9NWS1 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PARPBPQ9NWS1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms