Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CISHQ9NSE2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.22■□□□□ 0.35
CISHQ9NSE2 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CISHQ9NSE2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CISHQ9NSE2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CISHQ9NSE2 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CISHQ9NSE2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.21■□□□□ 0.35
CISHQ9NSE2 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CISHQ9NSE2 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.21■□□□□ 0.35
CISHQ9NSE2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CISHQ9NSE2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.21■□□□□ 0.35
CISHQ9NSE2 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.21■□□□□ 0.35
CISHQ9NSE2 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CISHQ9NSE2 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CISHQ9NSE2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CISHQ9NSE2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CISHQ9NSE2 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CISHQ9NSE2 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CISHQ9NSE2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.21■□□□□ 0.35
CISHQ9NSE2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.21■□□□□ 0.35
CISHQ9NSE2 CYP4F24P-201ENST00000586049 1580 ntBASIC17.21■□□□□ 0.35
CISHQ9NSE2 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CISHQ9NSE2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CISHQ9NSE2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CISHQ9NSE2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.21■□□□□ 0.35
CISHQ9NSE2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CISHQ9NSE2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.21■□□□□ 0.35
CISHQ9NSE2 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CISHQ9NSE2 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.21■□□□□ 0.35
CISHQ9NSE2 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.21■□□□□ 0.35
CISHQ9NSE2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.21■□□□□ 0.35
CISHQ9NSE2 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.21■□□□□ 0.35
CISHQ9NSE2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CISHQ9NSE2 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CISHQ9NSE2 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CISHQ9NSE2 AC008741.2-201ENST00000612792 3115 ntBASIC17.21■□□□□ 0.35
CISHQ9NSE2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CISHQ9NSE2 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.21■□□□□ 0.35
CISHQ9NSE2 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.21■□□□□ 0.35
CISHQ9NSE2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CISHQ9NSE2 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.21■□□□□ 0.35
CISHQ9NSE2 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CISHQ9NSE2 AC008894.3-201ENST00000624324 3103 ntBASIC17.21■□□□□ 0.34
CISHQ9NSE2 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
CISHQ9NSE2 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
CISHQ9NSE2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
CISHQ9NSE2 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CISHQ9NSE2 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CISHQ9NSE2 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CISHQ9NSE2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.2■□□□□ 0.34
CISHQ9NSE2 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CISHQ9NSE2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CISHQ9NSE2 BNIP3P1-202ENST00000550043 1585 ntBASIC17.2■□□□□ 0.34
CISHQ9NSE2 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CISHQ9NSE2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.2■□□□□ 0.34
CISHQ9NSE2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CISHQ9NSE2 AL035456.1-201ENST00000456064 1369 ntBASIC17.2■□□□□ 0.34
CISHQ9NSE2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CISHQ9NSE2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CISHQ9NSE2 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CISHQ9NSE2 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CISHQ9NSE2 AC004987.2-201ENST00000395959 1148 ntBASIC17.2■□□□□ 0.34
CISHQ9NSE2 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.2■□□□□ 0.34
CISHQ9NSE2 CNN2P2-201ENST00000443536 909 ntBASIC17.2■□□□□ 0.34
CISHQ9NSE2 CNN2P3-201ENST00000450201 906 ntBASIC17.2■□□□□ 0.34
CISHQ9NSE2 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.2■□□□□ 0.34
CISHQ9NSE2 AC092183.1-201ENST00000469884 875 ntBASIC17.2■□□□□ 0.34
CISHQ9NSE2 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.2■□□□□ 0.34
CISHQ9NSE2 RN7SL828P-201ENST00000607615 303 ntBASIC17.2■□□□□ 0.34
CISHQ9NSE2 AL133215.2-201ENST00000609242 977 ntBASIC17.2■□□□□ 0.34
CISHQ9NSE2 AL136317.3-201ENST00000618497 906 ntBASIC17.2■□□□□ 0.34
CISHQ9NSE2 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.2■□□□□ 0.34
CISHQ9NSE2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.2■□□□□ 0.34
CISHQ9NSE2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.2■□□□□ 0.34
CISHQ9NSE2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CISHQ9NSE2 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CISHQ9NSE2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CISHQ9NSE2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CISHQ9NSE2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
CISHQ9NSE2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CISHQ9NSE2 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CISHQ9NSE2 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.2■□□□□ 0.34
CISHQ9NSE2 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CISHQ9NSE2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CISHQ9NSE2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CISHQ9NSE2 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CISHQ9NSE2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CISHQ9NSE2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CISHQ9NSE2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CISHQ9NSE2 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CISHQ9NSE2 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CISHQ9NSE2 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CISHQ9NSE2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CISHQ9NSE2 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.19■□□□□ 0.34
CISHQ9NSE2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CISHQ9NSE2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CISHQ9NSE2 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CISHQ9NSE2 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.19■□□□□ 0.34
CISHQ9NSE2 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CISHQ9NSE2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms