Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 AC021087.3-201ENST00000565521 2881 ntTSL 2 BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 IGHGP-201ENST00000390555 1178 ntBASIC19.26■□□□□ 0.67
RTN4Q9NQC3 SLC25A1P3-201ENST00000395415 828 ntBASIC19.26■□□□□ 0.67
RTN4Q9NQC3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 AC096633.1-201ENST00000422446 749 ntBASIC19.26■□□□□ 0.67
RTN4Q9NQC3 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 AC068472.1-201ENST00000474589 881 ntBASIC19.26■□□□□ 0.67
RTN4Q9NQC3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 NAP1L6-201ENST00000373518 2044 ntBASIC19.25■□□□□ 0.67
RTN4Q9NQC3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 AC073869.1-201ENST00000415574 2762 ntBASIC19.25■□□□□ 0.67
RTN4Q9NQC3 APP-205ENST00000358918 2366 ntTSL 5 BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 AC027612.1-201ENST00000445234 2395 ntBASIC19.25■□□□□ 0.67
RTN4Q9NQC3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 AL596087.1-201ENST00000400979 1969 ntBASIC19.25■□□□□ 0.67
RTN4Q9NQC3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 MTCL1P1-201ENST00000446207 792 ntBASIC19.25■□□□□ 0.67
RTN4Q9NQC3 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 AC136621.1-201ENST00000624017 2304 ntBASIC19.25■□□□□ 0.67
RTN4Q9NQC3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTN4Q9NQC3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 AL671710.1-201ENST00000610245 2349 ntBASIC19.24■□□□□ 0.67
RTN4Q9NQC3 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC19.24■□□□□ 0.67
RTN4Q9NQC3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 STARP1-201ENST00000397973 869 ntBASIC19.24■□□□□ 0.67
RTN4Q9NQC3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 SLC25A3P1-201ENST00000443844 931 ntBASIC19.24■□□□□ 0.67
RTN4Q9NQC3 AC092597.1-201ENST00000487352 616 ntBASIC19.24■□□□□ 0.67
RTN4Q9NQC3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms