Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 PCDHA1-201ENST00000378133 2726 ntBASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 AC025048.3-201ENST00000590609 569 ntBASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 AC005702.4-201ENST00000618393 416 ntBASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 SPDYE17-201ENST00000412399 783 ntBASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 GAPDHP21-201ENST00000450301 1010 ntBASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 AC092337.1-201ENST00000568699 1129 ntBASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 AL450472.2-201ENST00000603663 1156 ntBASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 AC008494.3-201ENST00000606615 944 ntBASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.28□□□□□ -0.12
KIAA1549Q9HCM3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
KIAA1549Q9HCM3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KIAA1549Q9HCM3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KIAA1549Q9HCM3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
KIAA1549Q9HCM3 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KIAA1549Q9HCM3 AC007274.1-201ENST00000439805 662 ntBASIC14.27□□□□□ -0.12
KIAA1549Q9HCM3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.27□□□□□ -0.12
KIAA1549Q9HCM3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.27□□□□□ -0.12
KIAA1549Q9HCM3 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.27□□□□□ -0.12
KIAA1549Q9HCM3 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.27□□□□□ -0.12
KIAA1549Q9HCM3 AL391069.4-201ENST00000609583 481 ntBASIC14.27□□□□□ -0.12
KIAA1549Q9HCM3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.27□□□□□ -0.12
KIAA1549Q9HCM3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KIAA1549Q9HCM3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.27□□□□□ -0.12
KIAA1549Q9HCM3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KIAA1549Q9HCM3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KIAA1549Q9HCM3 CDC14C-201ENST00000428251 1719 ntBASIC14.27□□□□□ -0.12
KIAA1549Q9HCM3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KIAA1549Q9HCM3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
KIAA1549Q9HCM3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
KIAA1549Q9HCM3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.27□□□□□ -0.12
KIAA1549Q9HCM3 AC010491.1-201ENST00000563101 2797 ntBASIC14.27□□□□□ -0.13
KIAA1549Q9HCM3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KIAA1549Q9HCM3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.27□□□□□ -0.13
KIAA1549Q9HCM3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
KIAA1549Q9HCM3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
KIAA1549Q9HCM3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KIAA1549Q9HCM3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.27□□□□□ -0.13
KIAA1549Q9HCM3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
KIAA1549Q9HCM3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
KIAA1549Q9HCM3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
KIAA1549Q9HCM3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KIAA1549Q9HCM3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KIAA1549Q9HCM3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.27□□□□□ -0.13
KIAA1549Q9HCM3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KIAA1549Q9HCM3 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
KIAA1549Q9HCM3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
KIAA1549Q9HCM3 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms