Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
PCDH11XQ9BZA7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH11XQ9BZA7 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH11XQ9BZA7 ZBTB12BP-201ENST00000314232 1122 ntBASIC20.71■□□□□ 0.91
PCDH11XQ9BZA7 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PCDH11XQ9BZA7 HAUS4P1-201ENST00000406739 1145 ntBASIC20.71■□□□□ 0.91
PCDH11XQ9BZA7 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDH11XQ9BZA7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC20.71■□□□□ 0.91
PCDH11XQ9BZA7 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PCDH11XQ9BZA7 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC20.71■□□□□ 0.91
PCDH11XQ9BZA7 AGER-214ENST00000538695 487 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDH11XQ9BZA7 AC079316.1-201ENST00000548397 411 ntBASIC20.71■□□□□ 0.91
PCDH11XQ9BZA7 DERL2-202ENST00000570848 657 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDH11XQ9BZA7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC20.71■□□□□ 0.91
PCDH11XQ9BZA7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDH11XQ9BZA7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDH11XQ9BZA7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC20.71■□□□□ 0.91
PCDH11XQ9BZA7 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH11XQ9BZA7 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC20.71■□□□□ 0.91
PCDH11XQ9BZA7 HADH-212ENST00000638621 741 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDH11XQ9BZA7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDH11XQ9BZA7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDH11XQ9BZA7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH11XQ9BZA7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 AC016694.1-201ENST00000434179 700 ntBASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 AC099548.2-209ENST00000480264 625 ntBASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 AC244669.2-201ENST00000612320 853 ntBASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH11XQ9BZA7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 AL121723.1-201ENST00000445194 1519 ntBASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 BRF1-202ENST00000379932 884 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 AC093433.1-201ENST00000458048 571 ntBASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 GNRHR2-203ENST00000581100 1187 ntBASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 AC097359.3-201ENST00000603982 1210 ntBASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 AC244093.1-201ENST00000610837 814 ntBASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDH11XQ9BZA7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH11XQ9BZA7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PCDH11XQ9BZA7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
PCDH11XQ9BZA7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH11XQ9BZA7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH11XQ9BZA7 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDH11XQ9BZA7 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PCDH11XQ9BZA7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDH11XQ9BZA7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC20.68■□□□□ 0.9
PCDH11XQ9BZA7 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH11XQ9BZA7 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH11XQ9BZA7 AC084346.2-201ENST00000607097 949 ntBASIC20.68■□□□□ 0.9
PCDH11XQ9BZA7 RHOXF1P1-202ENST00000635473 501 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms