Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 U82695.1-201ENST00000635752 1889 ntBASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 AP002472.1-201ENST00000577490 586 ntBASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 AP001160.2-201ENST00000596071 487 ntBASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 AC022188.1-201ENST00000620960 1664 ntBASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 AC093724.1-201ENST00000448659 1027 ntBASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 AC134684.3-201ENST00000641758 218 ntBASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
YIPF4Q9BSR8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.27■□□□□ 0.04
YIPF4Q9BSR8 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.27■□□□□ 0.04
YIPF4Q9BSR8 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
YIPF4Q9BSR8 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.27■□□□□ 0.04
YIPF4Q9BSR8 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.27■□□□□ 0.04
YIPF4Q9BSR8 AC068587.6-202ENST00000641839 5619 ntBASIC15.27■□□□□ 0.04
YIPF4Q9BSR8 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
YIPF4Q9BSR8 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.27■□□□□ 0.04
YIPF4Q9BSR8 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms