Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMOQ99835 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.89■□□□□ 0.29
SMOQ99835 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMOQ99835 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMOQ99835 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.88■□□□□ 0.29
SMOQ99835 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SMOQ99835 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMOQ99835 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMOQ99835 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.88■□□□□ 0.29
SMOQ99835 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMOQ99835 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMOQ99835 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.88■□□□□ 0.29
SMOQ99835 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMOQ99835 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SMOQ99835 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMOQ99835 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMOQ99835 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.88■□□□□ 0.29
SMOQ99835 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.88■□□□□ 0.29
SMOQ99835 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.88■□□□□ 0.29
SMOQ99835 AC002472.2-201ENST00000442739 958 ntBASIC16.88■□□□□ 0.29
SMOQ99835 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMOQ99835 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMOQ99835 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.88■□□□□ 0.29
SMOQ99835 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.88■□□□□ 0.29
SMOQ99835 MIR3197-201ENST00000582241 73 ntBASIC16.88■□□□□ 0.29
SMOQ99835 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.88■□□□□ 0.29
SMOQ99835 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMOQ99835 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMOQ99835 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMOQ99835 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SMOQ99835 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMOQ99835 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMOQ99835 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.88■□□□□ 0.29
SMOQ99835 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
SMOQ99835 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMOQ99835 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMOQ99835 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMOQ99835 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.87■□□□□ 0.29
SMOQ99835 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMOQ99835 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.87■□□□□ 0.29
SMOQ99835 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.87■□□□□ 0.29
SMOQ99835 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.87■□□□□ 0.29
SMOQ99835 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMOQ99835 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMOQ99835 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.87■□□□□ 0.29
SMOQ99835 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.87■□□□□ 0.29
SMOQ99835 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMOQ99835 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.87■□□□□ 0.29
SMOQ99835 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMOQ99835 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMOQ99835 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SMOQ99835 SERBP1P5-201ENST00000510079 1181 ntBASIC16.87■□□□□ 0.29
SMOQ99835 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMOQ99835 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.87■□□□□ 0.29
SMOQ99835 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.87■□□□□ 0.29
SMOQ99835 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.87■□□□□ 0.29
SMOQ99835 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMOQ99835 LINC02560-201ENST00000596379 459 ntBASIC16.87■□□□□ 0.29
SMOQ99835 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.87■□□□□ 0.29
SMOQ99835 AL109936.8-201ENST00000641772 604 ntBASIC16.87■□□□□ 0.29
SMOQ99835 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMOQ99835 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
SMOQ99835 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMOQ99835 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.87■□□□□ 0.29
SMOQ99835 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMOQ99835 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMOQ99835 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMOQ99835 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.87■□□□□ 0.29
SMOQ99835 AC069224.1-201ENST00000566372 1715 ntBASIC16.87■□□□□ 0.29
SMOQ99835 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMOQ99835 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMOQ99835 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMOQ99835 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMOQ99835 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMOQ99835 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMOQ99835 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.86■□□□□ 0.29
SMOQ99835 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMOQ99835 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMOQ99835 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.86■□□□□ 0.29
SMOQ99835 REXO1L1P-202ENST00000608646 1974 ntBASIC16.86■□□□□ 0.29
SMOQ99835 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMOQ99835 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMOQ99835 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMOQ99835 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMOQ99835 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.86■□□□□ 0.29
SMOQ99835 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.86■□□□□ 0.29
SMOQ99835 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.86■□□□□ 0.29
SMOQ99835 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.86■□□□□ 0.29
SMOQ99835 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.86■□□□□ 0.29
SMOQ99835 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.86■□□□□ 0.29
SMOQ99835 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.86■□□□□ 0.29
SMOQ99835 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.86■□□□□ 0.29
SMOQ99835 AC025048.3-201ENST00000590609 569 ntBASIC16.86■□□□□ 0.29
SMOQ99835 AC005702.4-201ENST00000618393 416 ntBASIC16.86■□□□□ 0.29
SMOQ99835 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMOQ99835 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMOQ99835 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.86■□□□□ 0.29
SMOQ99835 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.86■□□□□ 0.29
SMOQ99835 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMOQ99835 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms