Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC21■□□□□ 0.95
ABCA3Q99758 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC21■□□□□ 0.95
ABCA3Q99758 AF254983.2-201ENST00000612331 135 ntBASIC21■□□□□ 0.95
ABCA3Q99758 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC21■□□□□ 0.95
ABCA3Q99758 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
ABCA3Q99758 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ABCA3Q99758 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ABCA3Q99758 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC21■□□□□ 0.95
ABCA3Q99758 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC21■□□□□ 0.95
ABCA3Q99758 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
ABCA3Q99758 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ABCA3Q99758 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ABCA3Q99758 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.99■□□□□ 0.95
ABCA3Q99758 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ABCA3Q99758 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ABCA3Q99758 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC20.99■□□□□ 0.95
ABCA3Q99758 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ABCA3Q99758 MPV17-205ENST00000402310 906 ntTSL 5 BASIC20.99■□□□□ 0.95
ABCA3Q99758 RN7SL11P-201ENST00000471305 293 ntBASIC20.99■□□□□ 0.95
ABCA3Q99758 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC20.99■□□□□ 0.95
ABCA3Q99758 AC126915.1-201ENST00000522847 1038 ntBASIC20.99■□□□□ 0.95
ABCA3Q99758 RNF41-210ENST00000552244 716 ntTSL 3 BASIC20.99■□□□□ 0.95
ABCA3Q99758 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC20.99■□□□□ 0.95
ABCA3Q99758 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
ABCA3Q99758 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.99■□□□□ 0.95
ABCA3Q99758 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC20.99■□□□□ 0.95
ABCA3Q99758 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ABCA3Q99758 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ABCA3Q99758 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ABCA3Q99758 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ABCA3Q99758 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ABCA3Q99758 AC068880.1-201ENST00000507289 2297 ntBASIC20.99■□□□□ 0.95
ABCA3Q99758 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ABCA3Q99758 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ABCA3Q99758 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC20.98■□□□□ 0.95
ABCA3Q99758 KLF2P2-201ENST00000416807 1039 ntBASIC20.98■□□□□ 0.95
ABCA3Q99758 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ABCA3Q99758 FTLP1-201ENST00000449155 526 ntBASIC20.98■□□□□ 0.95
ABCA3Q99758 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC20.98■□□□□ 0.95
ABCA3Q99758 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC20.98■□□□□ 0.95
ABCA3Q99758 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.98■□□□□ 0.95
ABCA3Q99758 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
ABCA3Q99758 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.98■□□□□ 0.95
ABCA3Q99758 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
ABCA3Q99758 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.98■□□□□ 0.95
ABCA3Q99758 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ABCA3Q99758 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ABCA3Q99758 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ABCA3Q99758 AC148477.4-201ENST00000613430 1793 ntBASIC20.98■□□□□ 0.95
ABCA3Q99758 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC20.98■□□□□ 0.95
ABCA3Q99758 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ABCA3Q99758 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ABCA3Q99758 B9D1-203ENST00000395615 805 ntTSL 3 BASIC20.98■□□□□ 0.95
ABCA3Q99758 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC20.98■□□□□ 0.95
ABCA3Q99758 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ABCA3Q99758 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC20.98■□□□□ 0.95
ABCA3Q99758 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
ABCA3Q99758 AC106820.3-201ENST00000561653 397 ntBASIC20.98■□□□□ 0.95
ABCA3Q99758 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC20.98■□□□□ 0.95
ABCA3Q99758 AC091544.8-201ENST00000619490 361 ntBASIC20.98■□□□□ 0.95
ABCA3Q99758 ETV2-208ENST00000621247 941 ntTSL 5 BASIC20.98■□□□□ 0.95
ABCA3Q99758 GPR39-203ENST00000622084 900 ntTSL 5 BASIC20.98■□□□□ 0.95
ABCA3Q99758 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC20.98■□□□□ 0.95
ABCA3Q99758 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ABCA3Q99758 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC20.98■□□□□ 0.95
ABCA3Q99758 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC20.98■□□□□ 0.95
ABCA3Q99758 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ABCA3Q99758 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ABCA3Q99758 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.97■□□□□ 0.95
ABCA3Q99758 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ABCA3Q99758 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ABCA3Q99758 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ABCA3Q99758 SNX21-203ENST00000372541 771 ntTSL 2 BASIC20.97■□□□□ 0.95
ABCA3Q99758 UFM1-202ENST00000379649 846 ntTSL 4 BASIC20.97■□□□□ 0.95
ABCA3Q99758 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC20.97■□□□□ 0.95
ABCA3Q99758 EEF1DP6-201ENST00000449232 372 ntBASIC20.97■□□□□ 0.95
ABCA3Q99758 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ABCA3Q99758 MBP-227ENST00000526111 581 ntTSL 4 BASIC20.97■□□□□ 0.95
ABCA3Q99758 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC20.97■□□□□ 0.95
ABCA3Q99758 PPY2P-201ENST00000582808 702 ntBASIC20.97■□□□□ 0.95
ABCA3Q99758 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ABCA3Q99758 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC20.97■□□□□ 0.95
ABCA3Q99758 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ABCA3Q99758 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ABCA3Q99758 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
ABCA3Q99758 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
ABCA3Q99758 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC20.96■□□□□ 0.95
ABCA3Q99758 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC20.96■□□□□ 0.95
ABCA3Q99758 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
ABCA3Q99758 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ABCA3Q99758 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC20.96■□□□□ 0.95
ABCA3Q99758 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ABCA3Q99758 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ABCA3Q99758 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ABCA3Q99758 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
ABCA3Q99758 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC20.96■□□□□ 0.95
ABCA3Q99758 RAC2-202ENST00000401529 569 ntTSL 4 BASIC20.96■□□□□ 0.95
ABCA3Q99758 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC20.96■□□□□ 0.95
ABCA3Q99758 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ABCA3Q99758 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms