Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AC026954.1-201ENST00000429771 1293 ntBASIC17.11■□□□□ 0.33
RAD9AQ99638 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAD9AQ99638 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RAD9AQ99638 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.11■□□□□ 0.33
RAD9AQ99638 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD9AQ99638 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAD9AQ99638 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.11■□□□□ 0.33
RAD9AQ99638 AC009542.2-202ENST00000619004 1067 ntBASIC17.11■□□□□ 0.33
RAD9AQ99638 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.11■□□□□ 0.33
RAD9AQ99638 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.11■□□□□ 0.33
RAD9AQ99638 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAD9AQ99638 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD9AQ99638 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD9AQ99638 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD9AQ99638 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAD9AQ99638 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD9AQ99638 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAD9AQ99638 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD9AQ99638 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD9AQ99638 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAD9AQ99638 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.1■□□□□ 0.33
RAD9AQ99638 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RAD9AQ99638 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAD9AQ99638 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAD9AQ99638 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RAD9AQ99638 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAD9AQ99638 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAD9AQ99638 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RAD9AQ99638 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
RAD9AQ99638 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RAD9AQ99638 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RAD9AQ99638 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
RAD9AQ99638 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.1■□□□□ 0.33
RAD9AQ99638 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RAD9AQ99638 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAD9AQ99638 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAD9AQ99638 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RAD9AQ99638 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.1■□□□□ 0.33
RAD9AQ99638 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.1■□□□□ 0.33
RAD9AQ99638 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.1■□□□□ 0.33
RAD9AQ99638 ZNF767P-206ENST00000513792 565 ntBASIC17.1■□□□□ 0.33
RAD9AQ99638 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.1■□□□□ 0.33
RAD9AQ99638 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.1■□□□□ 0.33
RAD9AQ99638 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.1■□□□□ 0.33
RAD9AQ99638 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.1■□□□□ 0.33
RAD9AQ99638 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAD9AQ99638 AC008687.7-202ENST00000637404 953 ntBASIC17.1■□□□□ 0.33
RAD9AQ99638 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAD9AQ99638 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RAD9AQ99638 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.1■□□□□ 0.33
RAD9AQ99638 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAD9AQ99638 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAD9AQ99638 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RAD9AQ99638 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.1■□□□□ 0.33
RAD9AQ99638 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.1■□□□□ 0.33
RAD9AQ99638 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.1■□□□□ 0.33
RAD9AQ99638 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAD9AQ99638 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.1■□□□□ 0.33
RAD9AQ99638 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
RAD9AQ99638 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD9AQ99638 OR6D1P-202ENST00000641007 5290 ntBASIC17.09■□□□□ 0.33
RAD9AQ99638 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RAD9AQ99638 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.09■□□□□ 0.33
RAD9AQ99638 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD9AQ99638 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD9AQ99638 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD9AQ99638 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAD9AQ99638 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RAD9AQ99638 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.09■□□□□ 0.33
RAD9AQ99638 AC006033.1-201ENST00000440505 426 ntBASIC17.09■□□□□ 0.33
RAD9AQ99638 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.09■□□□□ 0.33
RAD9AQ99638 AC245100.5-201ENST00000452108 331 ntBASIC17.09■□□□□ 0.33
RAD9AQ99638 AC093433.1-201ENST00000458048 571 ntBASIC17.09■□□□□ 0.33
RAD9AQ99638 VDAC1P7-201ENST00000462417 847 ntBASIC17.09■□□□□ 0.33
RAD9AQ99638 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
RAD9AQ99638 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAD9AQ99638 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.09■□□□□ 0.33
RAD9AQ99638 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.09■□□□□ 0.33
RAD9AQ99638 C2orf69P2-201ENST00000562032 1123 ntBASIC17.09■□□□□ 0.33
RAD9AQ99638 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.09■□□□□ 0.33
RAD9AQ99638 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.09■□□□□ 0.33
RAD9AQ99638 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.09■□□□□ 0.33
RAD9AQ99638 AC244669.2-201ENST00000612320 853 ntBASIC17.09■□□□□ 0.33
RAD9AQ99638 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.09■□□□□ 0.33
RAD9AQ99638 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RAD9AQ99638 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD9AQ99638 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD9AQ99638 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD9AQ99638 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.09■□□□□ 0.33
RAD9AQ99638 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.09■□□□□ 0.33
RAD9AQ99638 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.09■□□□□ 0.33
RAD9AQ99638 GGT3P-204ENST00000453783 1664 ntBASIC17.09■□□□□ 0.33
RAD9AQ99638 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAD9AQ99638 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.09■□□□□ 0.33
RAD9AQ99638 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.09■□□□□ 0.33
RAD9AQ99638 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD9AQ99638 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAD9AQ99638 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD9AQ99638 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.09■□□□□ 0.33
RAD9AQ99638 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms