Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 AC099548.2-209ENST00000480264 625 ntBASIC16.4■□□□□ 0.22
NOTCH4Q99466 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.4■□□□□ 0.22
NOTCH4Q99466 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.4■□□□□ 0.22
NOTCH4Q99466 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NOTCH4Q99466 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.4■□□□□ 0.22
NOTCH4Q99466 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.39■□□□□ 0.22
NOTCH4Q99466 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
NOTCH4Q99466 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NOTCH4Q99466 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.39■□□□□ 0.21
NOTCH4Q99466 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NOTCH4Q99466 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NOTCH4Q99466 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NOTCH4Q99466 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NOTCH4Q99466 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NOTCH4Q99466 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
NOTCH4Q99466 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
NOTCH4Q99466 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.39■□□□□ 0.21
NOTCH4Q99466 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.39■□□□□ 0.21
NOTCH4Q99466 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NOTCH4Q99466 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NOTCH4Q99466 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NOTCH4Q99466 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NOTCH4Q99466 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
NOTCH4Q99466 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.39■□□□□ 0.21
NOTCH4Q99466 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NOTCH4Q99466 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.39■□□□□ 0.21
NOTCH4Q99466 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
NOTCH4Q99466 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.39■□□□□ 0.21
NOTCH4Q99466 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NOTCH4Q99466 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.39■□□□□ 0.21
NOTCH4Q99466 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.39■□□□□ 0.21
NOTCH4Q99466 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.39■□□□□ 0.21
NOTCH4Q99466 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.39■□□□□ 0.21
NOTCH4Q99466 RHOXF1P1-202ENST00000635473 501 ntBASIC16.39■□□□□ 0.21
NOTCH4Q99466 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
NOTCH4Q99466 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
NOTCH4Q99466 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NOTCH4Q99466 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NOTCH4Q99466 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
NOTCH4Q99466 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NOTCH4Q99466 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NOTCH4Q99466 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NOTCH4Q99466 CNN2P8-201ENST00000421872 913 ntBASIC16.38■□□□□ 0.21
NOTCH4Q99466 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.38■□□□□ 0.21
NOTCH4Q99466 AC026954.1-201ENST00000429771 1293 ntBASIC16.38■□□□□ 0.21
NOTCH4Q99466 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.38■□□□□ 0.21
NOTCH4Q99466 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.38■□□□□ 0.21
NOTCH4Q99466 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
NOTCH4Q99466 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NOTCH4Q99466 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NOTCH4Q99466 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NOTCH4Q99466 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NOTCH4Q99466 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NOTCH4Q99466 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.38■□□□□ 0.21
NOTCH4Q99466 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NOTCH4Q99466 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
NOTCH4Q99466 AC018892.3-201ENST00000623986 2499 ntBASIC16.38■□□□□ 0.21
NOTCH4Q99466 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NOTCH4Q99466 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NOTCH4Q99466 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
NOTCH4Q99466 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NOTCH4Q99466 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NOTCH4Q99466 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.38■□□□□ 0.21
NOTCH4Q99466 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.38■□□□□ 0.21
NOTCH4Q99466 C1QBPP1-201ENST00000400117 770 ntBASIC16.38■□□□□ 0.21
NOTCH4Q99466 HAUS4P1-201ENST00000406739 1145 ntBASIC16.38■□□□□ 0.21
NOTCH4Q99466 AC016694.1-201ENST00000434179 700 ntBASIC16.38■□□□□ 0.21
NOTCH4Q99466 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NOTCH4Q99466 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NOTCH4Q99466 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.38■□□□□ 0.21
NOTCH4Q99466 RN7SL560P-201ENST00000577943 264 ntBASIC16.38■□□□□ 0.21
NOTCH4Q99466 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NOTCH4Q99466 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NOTCH4Q99466 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.38■□□□□ 0.21
NOTCH4Q99466 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
NOTCH4Q99466 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NOTCH4Q99466 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NOTCH4Q99466 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.37■□□□□ 0.21
NOTCH4Q99466 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NOTCH4Q99466 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NOTCH4Q99466 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.37■□□□□ 0.21
NOTCH4Q99466 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.37■□□□□ 0.21
NOTCH4Q99466 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NOTCH4Q99466 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NOTCH4Q99466 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NOTCH4Q99466 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
NOTCH4Q99466 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.37■□□□□ 0.21
NOTCH4Q99466 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.37■□□□□ 0.21
NOTCH4Q99466 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NOTCH4Q99466 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.37■□□□□ 0.21
NOTCH4Q99466 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NOTCH4Q99466 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NOTCH4Q99466 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NOTCH4Q99466 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NOTCH4Q99466 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NOTCH4Q99466 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NOTCH4Q99466 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.37■□□□□ 0.21
NOTCH4Q99466 AC026410.3-201ENST00000514280 936 ntBASIC16.37■□□□□ 0.21
NOTCH4Q99466 ENPP7P5-201ENST00000541031 1031 ntBASIC16.37■□□□□ 0.21
NOTCH4Q99466 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms