Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CASD1Q96PB1 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASD1Q96PB1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASD1Q96PB1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASD1Q96PB1 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CASD1Q96PB1 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CASD1Q96PB1 REXO1L1P-202ENST00000608646 1974 ntBASIC17.08■□□□□ 0.32
CASD1Q96PB1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.07■□□□□ 0.32
CASD1Q96PB1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASD1Q96PB1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.07■□□□□ 0.32
CASD1Q96PB1 PDIA3P1-201ENST00000471856 1510 ntBASIC17.07■□□□□ 0.32
CASD1Q96PB1 FLJ38576-201ENST00000623820 2459 ntBASIC17.07■□□□□ 0.32
CASD1Q96PB1 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CASD1Q96PB1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASD1Q96PB1 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASD1Q96PB1 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.07■□□□□ 0.32
CASD1Q96PB1 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASD1Q96PB1 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.07■□□□□ 0.32
CASD1Q96PB1 AC136604.1-201ENST00000418535 575 ntBASIC17.07■□□□□ 0.32
CASD1Q96PB1 AC134915.1-201ENST00000426461 574 ntBASIC17.07■□□□□ 0.32
CASD1Q96PB1 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CASD1Q96PB1 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
CASD1Q96PB1 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.07■□□□□ 0.32
CASD1Q96PB1 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CASD1Q96PB1 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.07■□□□□ 0.32
CASD1Q96PB1 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.07■□□□□ 0.32
CASD1Q96PB1 HNRNPUP1-201ENST00000554987 333 ntBASIC17.07■□□□□ 0.32
CASD1Q96PB1 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CASD1Q96PB1 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.07■□□□□ 0.32
CASD1Q96PB1 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.07■□□□□ 0.32
CASD1Q96PB1 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CASD1Q96PB1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASD1Q96PB1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASD1Q96PB1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASD1Q96PB1 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CASD1Q96PB1 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.07■□□□□ 0.32
CASD1Q96PB1 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CASD1Q96PB1 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CASD1Q96PB1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CASD1Q96PB1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASD1Q96PB1 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CASD1Q96PB1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CASD1Q96PB1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.06■□□□□ 0.32
CASD1Q96PB1 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.06■□□□□ 0.32
CASD1Q96PB1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASD1Q96PB1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CASD1Q96PB1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASD1Q96PB1 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.06■□□□□ 0.32
CASD1Q96PB1 AC093525.8-201ENST00000624099 1342 ntBASIC17.06■□□□□ 0.32
CASD1Q96PB1 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASD1Q96PB1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASD1Q96PB1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CASD1Q96PB1 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASD1Q96PB1 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.06■□□□□ 0.32
CASD1Q96PB1 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.06■□□□□ 0.32
CASD1Q96PB1 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.06■□□□□ 0.32
CASD1Q96PB1 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.06■□□□□ 0.32
CASD1Q96PB1 ENPP7P5-201ENST00000541031 1031 ntBASIC17.06■□□□□ 0.32
CASD1Q96PB1 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.06■□□□□ 0.32
CASD1Q96PB1 AL450472.2-201ENST00000603663 1156 ntBASIC17.06■□□□□ 0.32
CASD1Q96PB1 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.06■□□□□ 0.32
CASD1Q96PB1 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.06■□□□□ 0.32
CASD1Q96PB1 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CASD1Q96PB1 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASD1Q96PB1 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASD1Q96PB1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASD1Q96PB1 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CASD1Q96PB1 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CASD1Q96PB1 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASD1Q96PB1 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.06■□□□□ 0.32
CASD1Q96PB1 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.06■□□□□ 0.32
CASD1Q96PB1 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CASD1Q96PB1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASD1Q96PB1 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASD1Q96PB1 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASD1Q96PB1 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASD1Q96PB1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CASD1Q96PB1 INTS4P2-202ENST00000614726 2019 ntBASIC17.06■□□□□ 0.32
CASD1Q96PB1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CASD1Q96PB1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CASD1Q96PB1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CASD1Q96PB1 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.05■□□□□ 0.32
CASD1Q96PB1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CASD1Q96PB1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CASD1Q96PB1 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CASD1Q96PB1 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CASD1Q96PB1 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CASD1Q96PB1 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CASD1Q96PB1 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CASD1Q96PB1 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CASD1Q96PB1 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CASD1Q96PB1 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CASD1Q96PB1 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.05■□□□□ 0.32
CASD1Q96PB1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CASD1Q96PB1 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CASD1Q96PB1 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CASD1Q96PB1 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.05■□□□□ 0.32
CASD1Q96PB1 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CASD1Q96PB1 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.05■□□□□ 0.32
CASD1Q96PB1 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms