Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 AC234783.1-201ENST00000441761 496 ntBASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 AL589987.1-201ENST00000453380 819 ntBASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 UBALD1-205ENST00000590891 2641 ntBASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC46A1Q96NT5 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 AC098850.1-201ENST00000419919 790 ntBASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 RRP7BP-205ENST00000566851 833 ntBASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 TMEM261P1-201ENST00000604899 340 ntBASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 COX11-210ENST00000639671 696 ntBASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC46A1Q96NT5 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms