Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
USP13Q92995 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP13Q92995 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP13Q92995 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
USP13Q92995 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
USP13Q92995 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.96■□□□□ 0.3
USP13Q92995 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
USP13Q92995 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
USP13Q92995 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
USP13Q92995 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.95■□□□□ 0.3
USP13Q92995 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
USP13Q92995 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USP13Q92995 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP13Q92995 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USP13Q92995 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP13Q92995 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
USP13Q92995 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.95■□□□□ 0.3
USP13Q92995 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP13Q92995 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP13Q92995 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.95■□□□□ 0.3
USP13Q92995 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USP13Q92995 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.95■□□□□ 0.3
USP13Q92995 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP13Q92995 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.95■□□□□ 0.3
USP13Q92995 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.95■□□□□ 0.3
USP13Q92995 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.95■□□□□ 0.3
USP13Q92995 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.95■□□□□ 0.3
USP13Q92995 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
USP13Q92995 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.95■□□□□ 0.3
USP13Q92995 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP13Q92995 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USP13Q92995 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP13Q92995 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.95■□□□□ 0.3
USP13Q92995 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP13Q92995 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.95■□□□□ 0.3
USP13Q92995 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP13Q92995 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.95■□□□□ 0.3
USP13Q92995 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.95■□□□□ 0.3
USP13Q92995 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USP13Q92995 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP13Q92995 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP13Q92995 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USP13Q92995 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USP13Q92995 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP13Q92995 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USP13Q92995 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP13Q92995 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP13Q92995 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
USP13Q92995 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP13Q92995 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP13Q92995 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.94■□□□□ 0.3
USP13Q92995 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP13Q92995 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP13Q92995 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP13Q92995 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP13Q92995 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP13Q92995 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP13Q92995 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.94■□□□□ 0.3
USP13Q92995 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP13Q92995 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.94■□□□□ 0.3
USP13Q92995 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.94■□□□□ 0.3
USP13Q92995 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP13Q92995 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.94■□□□□ 0.3
USP13Q92995 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.94■□□□□ 0.3
USP13Q92995 GAPDHP21-201ENST00000450301 1010 ntBASIC16.94■□□□□ 0.3
USP13Q92995 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.94■□□□□ 0.3
USP13Q92995 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP13Q92995 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.94■□□□□ 0.3
USP13Q92995 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
USP13Q92995 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.94■□□□□ 0.3
USP13Q92995 AC061975.2-201ENST00000581722 295 ntBASIC16.94■□□□□ 0.3
USP13Q92995 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.94■□□□□ 0.3
USP13Q92995 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
USP13Q92995 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
USP13Q92995 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.94■□□□□ 0.3
USP13Q92995 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
USP13Q92995 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP13Q92995 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP13Q92995 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP13Q92995 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP13Q92995 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.94■□□□□ 0.3
USP13Q92995 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP13Q92995 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP13Q92995 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP13Q92995 AC006538.1-201ENST00000567905 1585 ntBASIC16.94■□□□□ 0.3
USP13Q92995 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP13Q92995 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP13Q92995 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
USP13Q92995 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
USP13Q92995 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.93■□□□□ 0.3
USP13Q92995 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
USP13Q92995 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
USP13Q92995 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
USP13Q92995 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
USP13Q92995 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
USP13Q92995 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP13Q92995 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
USP13Q92995 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP13Q92995 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP13Q92995 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms