Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRQ92834 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRQ92834 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
RPGRQ92834 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRQ92834 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRQ92834 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.76■□□□□ 0.75
RPGRQ92834 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC19.76■□□□□ 0.75
RPGRQ92834 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPGRQ92834 UBALD1-205ENST00000590891 2641 ntBASIC19.75■□□□□ 0.75
RPGRQ92834 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RPGRQ92834 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPGRQ92834 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RPGRQ92834 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPGRQ92834 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RPGRQ92834 INTS4P2-202ENST00000614726 2019 ntBASIC19.75■□□□□ 0.75
RPGRQ92834 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPGRQ92834 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPGRQ92834 AC009053.2-201ENST00000563701 2365 ntBASIC19.75■□□□□ 0.75
RPGRQ92834 APOC3-202ENST00000375345 604 ntTSL 5 BASIC19.75■□□□□ 0.75
RPGRQ92834 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPGRQ92834 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPGRQ92834 BRWD1P1-201ENST00000401091 371 ntBASIC19.75■□□□□ 0.75
RPGRQ92834 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RPGRQ92834 MIR1908-201ENST00000410394 80 ntBASIC19.75■□□□□ 0.75
RPGRQ92834 USB1-202ENST00000423271 1217 ntTSL 2 BASIC19.75■□□□□ 0.75
RPGRQ92834 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPGRQ92834 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC19.75■□□□□ 0.75
RPGRQ92834 RPL13AP25-201ENST00000484130 612 ntBASIC19.75■□□□□ 0.75
RPGRQ92834 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPGRQ92834 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC19.75■□□□□ 0.75
RPGRQ92834 AC068587.3-201ENST00000526613 355 ntBASIC19.75■□□□□ 0.75
RPGRQ92834 ENPP7P5-201ENST00000541031 1031 ntBASIC19.75■□□□□ 0.75
RPGRQ92834 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC19.75■□□□□ 0.75
RPGRQ92834 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC19.75■□□□□ 0.75
RPGRQ92834 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC19.75■□□□□ 0.75
RPGRQ92834 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC19.75■□□□□ 0.75
RPGRQ92834 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC19.75■□□□□ 0.75
RPGRQ92834 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPGRQ92834 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.75■□□□□ 0.75
RPGRQ92834 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPGRQ92834 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPGRQ92834 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPGRQ92834 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPGRQ92834 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPGRQ92834 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPGRQ92834 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.75■□□□□ 0.75
RPGRQ92834 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPGRQ92834 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPGRQ92834 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPGRQ92834 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPGRQ92834 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RPGRQ92834 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPGRQ92834 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPGRQ92834 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPGRQ92834 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RPGRQ92834 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC19.74■□□□□ 0.75
RPGRQ92834 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.74■□□□□ 0.75
RPGRQ92834 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC19.74■□□□□ 0.75
RPGRQ92834 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPGRQ92834 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RPGRQ92834 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPGRQ92834 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.74■□□□□ 0.75
RPGRQ92834 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPGRQ92834 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.74■□□□□ 0.75
RPGRQ92834 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPGRQ92834 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RPGRQ92834 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPGRQ92834 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPGRQ92834 AC005229.1-201ENST00000392885 409 ntBASIC19.74■□□□□ 0.75
RPGRQ92834 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC19.74■□□□□ 0.75
RPGRQ92834 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPGRQ92834 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPGRQ92834 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC19.74■□□□□ 0.75
RPGRQ92834 CSF2RBP1-201ENST00000447905 391 ntBASIC19.74■□□□□ 0.75
RPGRQ92834 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC19.74■□□□□ 0.75
RPGRQ92834 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RPGRQ92834 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.74■□□□□ 0.75
RPGRQ92834 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPGRQ92834 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPGRQ92834 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC19.74■□□□□ 0.75
RPGRQ92834 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC19.74■□□□□ 0.75
RPGRQ92834 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC19.74■□□□□ 0.75
RPGRQ92834 GPR182-203ENST00000622922 591 ntBASIC19.74■□□□□ 0.75
RPGRQ92834 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPGRQ92834 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPGRQ92834 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPGRQ92834 RNF216P1-203ENST00000404404 2427 ntBASIC19.74■□□□□ 0.75
RPGRQ92834 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPGRQ92834 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.74■□□□□ 0.75
RPGRQ92834 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPGRQ92834 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPGRQ92834 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPGRQ92834 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.74■□□□□ 0.75
RPGRQ92834 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPGRQ92834 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RPGRQ92834 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPGRQ92834 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.73■□□□□ 0.75
RPGRQ92834 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPGRQ92834 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC19.73■□□□□ 0.75
RPGRQ92834 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms