Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 BX005266.1-201ENST00000473402 457 ntBASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 AC074051.2-201ENST00000565115 352 ntBASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 AC005412.3-201ENST00000580309 715 ntBASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RAB3IL1Q8TBN0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.21■□□□□ 0.18
RAB3IL1Q8TBN0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RAB3IL1Q8TBN0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.18
RAB3IL1Q8TBN0 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
RAB3IL1Q8TBN0 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RAB3IL1Q8TBN0 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RAB3IL1Q8TBN0 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 AP002383.4-201ENST00000442518 975 ntBASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 LINC00265-3P-201ENST00000447588 903 ntBASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 AL139288.1-201ENST00000623748 933 ntBASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RAB3IL1Q8TBN0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 AC005622.1-201ENST00000636801 1703 ntBASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 PRAL-201ENST00000624952 3286 ntBASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 U82695.1-201ENST00000635752 1889 ntBASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 AC104819.1-201ENST00000504587 486 ntBASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 AP002414.4-201ENST00000589764 1148 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms