Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 HLA-J-202ENST00000469281 1241 ntBASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 SPDYE18-201ENST00000510091 1050 ntBASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 AC140912.1-201ENST00000577171 1054 ntBASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 MEIS3P1-201ENST00000495167 958 ntBASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 AL033527.5-202ENST00000641632 1098 ntBASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SHKBP1Q8TBC3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SHKBP1Q8TBC3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.96■□□□□ 0.3
SHKBP1Q8TBC3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.96■□□□□ 0.3
SHKBP1Q8TBC3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.96■□□□□ 0.3
SHKBP1Q8TBC3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
SHKBP1Q8TBC3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 AC006449.5-201ENST00000610658 2098 ntBASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 AC078925.2-201ENST00000624013 1973 ntBASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 AC007950.2-201ENST00000615045 2347 ntBASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 DFFBP1-201ENST00000433250 979 ntBASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 CU639417.3-201ENST00000624240 1404 ntBASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms