Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
NKX2-3Q8TAU0 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
NKX2-3Q8TAU0 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NKX2-3Q8TAU0 AP006294.1-201ENST00000415407 339 ntBASIC19.02■□□□□ 0.64
NKX2-3Q8TAU0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.02■□□□□ 0.64
NKX2-3Q8TAU0 HLA-V-204ENST00000476601 1289 ntBASIC19.02■□□□□ 0.64
NKX2-3Q8TAU0 AL079307.3-201ENST00000556114 283 ntBASIC19.02■□□□□ 0.64
NKX2-3Q8TAU0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.02■□□□□ 0.64
NKX2-3Q8TAU0 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.02■□□□□ 0.64
NKX2-3Q8TAU0 TEX28P1-201ENST00000613479 1221 ntBASIC19.02■□□□□ 0.64
NKX2-3Q8TAU0 TEX28P2-201ENST00000617764 1221 ntBASIC19.02■□□□□ 0.64
NKX2-3Q8TAU0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.02■□□□□ 0.64
NKX2-3Q8TAU0 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
NKX2-3Q8TAU0 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NKX2-3Q8TAU0 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NKX2-3Q8TAU0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.02■□□□□ 0.63
NKX2-3Q8TAU0 CDC14C-201ENST00000428251 1719 ntBASIC19.02■□□□□ 0.63
NKX2-3Q8TAU0 AC069224.1-201ENST00000566372 1715 ntBASIC19.02■□□□□ 0.63
NKX2-3Q8TAU0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
NKX2-3Q8TAU0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
NKX2-3Q8TAU0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NKX2-3Q8TAU0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
NKX2-3Q8TAU0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 AC092658.1-201ENST00000505836 891 ntBASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 AC024267.1-201ENST00000582320 895 ntBASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 AL844908.2-201ENST00000609461 460 ntBASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 AC004790.1-201ENST00000612686 536 ntBASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NKX2-3Q8TAU0 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 AL512384.1-201ENST00000406683 331 ntBASIC19■□□□□ 0.63
NKX2-3Q8TAU0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 INE1-201ENST00000456273 945 ntBASIC19■□□□□ 0.63
NKX2-3Q8TAU0 RN7SL752P-201ENST00000463779 287 ntBASIC19■□□□□ 0.63
NKX2-3Q8TAU0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 API5-211ENST00000534695 560 ntTSL 5 BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 AL512361.1-201ENST00000554200 418 ntBASIC19■□□□□ 0.63
NKX2-3Q8TAU0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 AL365330.1-201ENST00000607459 531 ntBASIC19■□□□□ 0.63
NKX2-3Q8TAU0 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19■□□□□ 0.63
NKX2-3Q8TAU0 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
NKX2-3Q8TAU0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms